List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 49673

chitinase
This group has 10 members: 10 [B]acteria
Fingerprint: WEFPVSG

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Salinispora arenicola (strain CNS-205)SALAI03334  UniProtKB/TrEMBL A8LY79  Chitinase
[B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO03196  UniProtKB/TrEMBL A4XDN4  Chitinase. Glycosyl Hydrolase family 18. precursor
[B] Phytoplasma sp. (strain STRAWB1)STRAW06915  UniProtKB/TrEMBL Q827K6  Putative chitinase C
[B] Streptomyces coelicolorSTRCO01413  UniProtKB/TrEMBL Q9Z9M7  SC6D7.10, chiD, chitinase (putative secreted protein), len: 417 aa. Previously sequenced and characterised TR:Q9Z9M7(EMBL:AB017011) fasta scores opt: 2877 z-score: 3125.2 E():0 100.0% identity in 417 aa overlap. Contains a Pfam match to entry PF00704 Glyco_hydro_18, Glycosyl hydrolases family 18 and a Prosite hit to PS01095 Chitinases family 18 active site. Contains possible N-terminal region signal peptide sequence chitinase (putative secreted protein)
[B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG05977  UniProtKB/TrEMBL B1W4B6  Putative chitinase
[B] Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)HERA202724  UniProtKB/TrEMBL A9B1U6  Chitinase precursor
[B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT600392  UniProtKB/TrEMBL B5YCM1  Chitinase A1
[B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD00475  UniProtKB/TrEMBL B8DZ83  Chitinase
[B] Stenotrophomonas maltophilia (strain K279a)STRMK03165  UniProtKB/TrEMBL B2FN84  Putative chitinase A1 precursor
[B] Stenotrophomonas maltophilia (strain R551-3)STRM502794  UniProtKB/TrEMBL B4SQH8  Glycoside hydrolase family 18