List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 17756

D-amino acid dehydrogenase small subunit
This group has 5 members: 5 [B]acteria
Fingerprint: TIMDETH

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Methylobacterium nodulans (strain ORS2060 / LMG 21967)METNO01022  UniProtKB/Swiss-Prot DADA_METNO  FAD dependent oxidoreductase
[B] Dinoroseobacter shibae (strain DFL 12)DINSH00550  UniProtKB/TrEMBL A8LPI1  D-amino-acid dehydrogenase
[B] Paracoccus denitrificans (strain Pd 1222)PARDP00783  UniProtKB/Swiss-Prot DADA_PARDP  D-amino-acid dehydrogenase PFAM: FAD dependent oxidoreductase KEGG: rsp:RSP_3113 D-amino acid dehydrogenase small subunit
[B] Neisseria meningitidis serogroup ANEIMA00082  UniProtKB/Swiss-Prot DADA_NEIMA  D-amino acid dehydrogenase small subunit
[B] Pseudomonas putida (strain KT2440)PSEPK04345  UniProtKB/Swiss-Prot DADA1_PSEPK  similar to GB:X12534, SP:P10114, PID:35861, and PID:412184; identified by sequence similarity; putative D-amino acid dehydrogenase, small subunit