| [B] Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) | MYCA902769 | RISB_MYCA9 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Mycobacterium avium (strain 104) | MYCA103168 | RISB_MYCA1 | 6,7-dimethyl-8-ribityllumazine synthase identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114 |
| [B] Mycobacterium paratuberculosis | MYCPA01130 | RISB_MYCPA | RibH |
| [B] Mycobacterium gilvum (strain PYR-GCK) | MYCGI03621 | RISB_MYCGI | 6,7-dimethyl-8-ribityllumazine synthase PFAM: 6,7-dimethyl-8-ribityllumazine synthase KEGG: mtc:MT1459 riboflavin synthase beta chain |
| [B] Mycobacterium leprae | MYCLE00556 | RISB_MYCLE | Similar to M. tuberculosis ribH, Rv1416, riboflavin synthase [beta] chain, SW:RISB_MYCTU (P71685) (154 aa); Fasta score E(): 0, 78.9% identity in 152 aa overlap. Similar to many e.g. Actinobacillus pleuropneumoniae ribH, 6,7-dimethyl-8-ribityllumazine synthase, SW:RISB_ACTPL (P50856) (153 aa); Fasta score E(): 1.7e-15, 44.3% identity in 140 aa overlap. Contains Pfam match to entry PF00885 DMRL_synthase, 6,7-dimethyl-8-ribityllumazine synthase. 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Mycobacterium leprae (strain Br4923) | MYCLB00552 | RISB_MYCLB | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Mycobacterium marinum (strain ATCC BAA-535 / M) | MYCMM02183 | RISB_MYCMM | Riboflavin synthase beta chain RibH |
| [B] Mycobacterium sp. (strain JLS) | MYCSJ02375 | RISB_MYCSJ | Riboflavin synthase PFAM: 6,7-dimethyl-8-ribityllumazine synthase KEGG: mmc:Mmcs_2391 riboflavin synthase |
| [B] Mycobacterium sp. (strain KMS) | MYCSK02371 | RISB_MYCSK | Riboflavin synthase PFAM: 6,7-dimethyl-8-ribityllumazine synthase KEGG: mmc:Mmcs_2391 riboflavin synthase |
| [B] Mycobacterium sp. (strain MCS) | MYCSS02358 | RISB_MYCSS | Riboflavin synthase |
| [B] Mycobacterium bovis | MYCBO01445 | NP_855103.1 | Mb1451, ribH, len: 154 aa. Equivalent to Rv1416, len: 154 aa, from Mycobacterium tuberculosis strain H37Rv, (100% identity in 154 aa overlap). Probable ribH, riboflavin synthase beta chain (EC 2.5.1.9), similar to many e.g. RISB_ECOLI|P25540 Escherichia coli (156 aa), FASTA scores: opt: 330, E(): 1.8e-15, (44.1% identity in 145 aa overlap). Note alternative GTG start possible overlapping the stop codon of Rv1415|MTCY21B4.33. BELONGS TO THE DMRL SYNTHASE FAMILY. PROBABLE RIBOFLAVIN SYNTHASE BETA CHAIN RIBH (6,7-dimethyl-8-ribityllumazine synthase) (DMRL synthase) (Lumazine synthase) |
| [B] Mycobacterium bovis (strain BCG / Paris 1173P2) | MYCBP01450 | A1KIK5 | Probable riboflavin synthase beta chain ribH |
| [B] Mycobacterium tuberculosis | MYCTU02616 | RISB_MYCTU | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) | MYCTA01435 | A5U2B8 | Riboflavin synthase subunit beta |
| [B] Mycobacterium tuberculosis (strain F11) | MYCTF01403 | A5WM99 | riboflavin synthase beta chain ribH Mapped to H37Rv Rv1416 |
| [B] Mycobacterium ulcerans (strain Agy99) | MYCUA01485 | RISB_MYCUA | riboflavin synthase beta chain RibH Detected in the cytoplasmic fraction by 2D-LC- MS/MS. cytoplasmic protein riboflavin synthase is a bifunctional enzyme complex involved in riboflavin synthesis. riboflavin synthase catalyzes the formation of riboflavin from 5- amino-6-(1'-D)- ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2- butanone-4-phosphate via 6,7- dimethyl-8-lumazine. the BetA subunit catalyzes the condensation of 5-amino-6-(1'-D)-ribityl- amino-2,4(1H,3H)- pyrimidinedione with L-3,4-dihydrohy-2-butanone- 4- phosphate yielding 6,7-dimethyl-8-lumazine. |
| [B] Frankia sp. (strain EAN1pec) | FRASN01679 | A8LE28 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) | KINRD02941 | RISB_KINRD | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Tropheryma whipplei (strain TW08/27) | TROW800673 | RISB_TROW8 | Similar to Aquifex aeolicus 6,7-dimethyl-8-ribityllumazine synthase RibH or aq_132 SWALL:RISB_AQUAE (SWALL:O66529) (154 aa) fasta scores: E(): 1.7e-11, 36.69% id in 139 aa 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Tropheryma whipplei (strain Twist) | TROWT00689 | RISB_TROWT | riboflavin synthase beta chain |
| [B] Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) | CLAM300976 | RISB_CLAM3 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) | CLAMS02763 | RISB_CLAMS | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Leifsonia xyli (subsp. xyli) | LEIXX00314 | RISB_LEIXX | identified by sequence similarity riboflavin synthase, beta chain |
| [B] Arthrobacter aurescens (strain TC1) | ARTAT01739 | RISB_ARTAT | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) | ARTCA01655 | RISB_ARTCA | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Arthrobacter sp. (strain FB24) | ARTS201668 | RISB_ARTS2 | Riboflavin synthase PFAM: 6,7-dimethyl-8-ribityllumazine synthase KEGG: sma:SAV6905 putative riboflavin synthase beta subunit |
| [B] Kocuria rhizophila (strain ATCC 9341 / NBRC 12708 / DC2201) | KOCRD01168 | RISB_KOCRD | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) | RENSM02252 | RISB_RENSM | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Caulobacter crescentus | CAUCR01339 | RISB2_CAUCR | 6,7-dimethyl-8-ribityllumazine synthase 2 |
| [B] Caulobacter sp. (strain K31) | CAUSK02984 | B0T1I3 | 67-dimethyl-8-ribityllumazine synthase |
| [B] Phenylobacterium zucineum (strain HLK1) | PHEZH01660 | B4RB29 | Riboflavin synthase, beta subunit |
| [B] Bartonella bacilliformis (strain ATCC 35685 / KC583) | BARBK00596 | RISB_BARBK | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Bartonella henselae | BARHE00728 | RISB_BARHE | Riboflavin synthase beta chain |
| [B] Bartonella quintana | BARQU00530 | RISB_BARQU | Riboflavin synthase beta chain |
| [B] Bartonella tribocorum (strain CIP 105476 / IBS 506) | BART101051 | RISB_BART1 | riboflavin synthase beta chain (Q9REF4) 67-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) (Riboflavin synthase beta chain),InterPro; 67-dimethyl-8-ribityllumazine synthase hypothetical protein |
| [B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) | METSB00646 | RISB_METSB | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Bradyrhizobium japonicum | BRAJA04973 | RISB1_BRAJA | 6,7-dimethyl-8-ribityllumazine synthase 1 |
| [B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) | BRASB04335 | A5EKH9 | Riboflavin synthase, beta chain |
| [B] Bradyrhizobium sp. (strain ORS278) | BRASO04183 | A4YW93 | Riboflavin synthase, beta chain |
| [B] Nitrobacter hamburgensis (strain X14 / DSM 10229) | NITHX01708 | RISB_NITHX | Riboflavin synthase |
| [B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) | NITWN01627 | RISB_NITWN | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) | OLICO01836 | RISB_OLICO | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Rhodopseudomonas palustris | RHOPA02721 | RISB1_RHOPA | observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished riboflavin synthase, beta chain |
| [B] Rhodopseudomonas palustris (strain BisA53) | RHOP502769 | RISB_RHOP5 | Riboflavin synthase PFAM: 6,7-dimethyl-8-ribityllumazine synthase KEGG: rpc:RPC_2663 riboflavin synthase |
| [B] Rhodopseudomonas palustris (strain BisB18) | RHOPB02621 | Q214H3 | Riboflavin synthase |
| [B] Rhodopseudomonas palustris (strain BisB5) | RHOPS02658 | Q136T5 | Riboflavin synthase |
| [B] Rhodopseudomonas palustris (strain HaA2) | RHOP202626 | Q2IWS0 | Riboflavin synthase |
| [B] Rhodopseudomonas palustris (strain TIE-1) | RHOPT02949 | B3QJK8 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Brucella abortus | BRUAB00728 | RISB1_BRUAB | similar to BR0769, riboflavin synthase, beta subunit RibH-1, riboflavin synthase, beta subunit |
| [B] Brucella abortus (strain 2308) | BRUA200784 | Q2YNC6 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Brucella abortus (strain S19) | BRUA100698 | B2S517 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Brucella canis (strain ATCC 23365 / NCTC 10854) | BRUC200739 | A9MAE9 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Brucella melitensis | BRUME01178 | RISB1_BRUME | 6,7-dimethyl-8-ribityllumazine synthase 1 |
| [B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) | BRUO200680 | A5VPV1 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Brucella suis | BRUSU00738 | RISB1_BRUSU | identified by match to TIGR protein family HMM TIGR00114 riboflavin synthase, beta subunit |
| [B] Brucella suis (strain ATCC 23445 / NCTC 10510) | BRUSI00755 | B0CL94 | 6,7-dimethyl-8-ribityllumazine synthase GO_function: 6,7-dimethyl-8-ribityllumazine synthase activity [GO ID 0000906]; GO_process: riboflavin biosynthetic process [GO ID 0009231] |
| [B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) | OCHA402494 | A6X1Y5 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) | METC403319 | RISB_METC4 | 6,7-dimethyl-8-ribityllumazine synthase KEGG: mex:Mext_3162 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase |
| [B] Methylobacterium extorquens (strain PA1) | METEP03114 | RISB_METEP | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) | METPB03299 | RISB_METPB | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Mesorhizobium sp. (strain BNC1) | MESSB01129 | Q11J91 | 6,7-dimethyl-8-ribityllumazine synthase PFAM: 6,7-dimethyl-8-ribityllumazine synthase KEGG: atc:AGR_C_2165 riboflavin synthase |
| [B] Rhizobium loti | RHILO06586 | RISB2_RHILO | riboflavin synthase, beta chain (ribH) |
| [B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868) | AGRRK01317 | B9JCY2 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Agrobacterium tumefaciens (strain C58 / ATCC 33970) | AGRT501149 | RISB_AGRT5 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Rhizobium etli (strain CFN 42 / ATCC 51251) | RHIEC01491 | Q2KA08 | riboflavin synthase, beta chain protein similar to AGR_C_2165p [Agrobacterium tumefaciens] and ribH (SMc01777) [Sinorhizobium meliloti] Similar to entrez-protein:Q92QU0 Putative location:bacterial inner membrane Psort-Score: 0.1341; go_component: riboflavin synthase complex [goid 0009349]; go_function: transferase activity [goid 0016740]; go_function: riboflavin synthase activity [goid 0004746]; go_process: vitamin B2 biosynthesis [goid 0009231] |
| [B] Rhizobium etli (strain CIAT 652) | RHIE601576 | B3PVD3 | 6,7-dimethyl-8-ribityllumazine synthase protein |
| [B] Rhizobium leguminosarum bv. trifolii (strain WSM2304) | RHILW01176 | B5ZXV1 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Rhizobium leguminosarum bv. viciae (strain 3841) | RHIL301637 | Q1MIT3 | putative 6,7-dimethyl-8-ribityllumazine synthase similarity:fasta; with=UniProt:RISB_BARHE (EMBL:BHE132928); Bartonella henselae (Rochalimaea henselae).; ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) (Riboflavin synthase beta chain).; length=155; id 65.035; 143 aa overlap; query 8-150; subject 10-149 similarity:fasta; with=UniProt:RISB_AGRT5 (EMBL:AE008046); Agrobacterium tumefaciens (strain C58/ATCC 33970).; ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) (Riboflavin synthase beta chain).; length=148; id 88.356; 146 aa overlap; query 5-150; subject 2-147 |
| [B] Rhizobium meliloti | RHIME01202 | RISB1_RHIME | Product confidence : probable Gene name confidence : probable predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE PROTEIN |
| [B] Sinorhizobium medicae (strain WSM419) | SINMW00813 | A6U7P7 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) | AZOC501260 | RISB_AZOC5 | Riboflavin synthase beta chain |
| [B] Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) | XANP204180 | RISB_XANP2 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Hyphomonas neptunium (strain ATCC 15444) | HYPNA02016 | Q0C0J0 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Maricaulis maris (strain MCS10) | MARMM01528 | Q0APG3 | Riboflavin synthase |
| [B] Roseobacter denitrificans (strain ATCC 33942 / OCh 114) | ROSDO01677 | Q169C3 | riboflavin synthase, beta subunit |
| [B] Silicibacter pomeroyi | SILPO01724 | Q5LSK5 | identified by similarity to SP:P11998; match to protein family HMM PF00885 riboflavin synthase, beta subunit |
| [B] Acidiphilium cryptum (strain JF-5) | ACICJ02074 | A5G0D5 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Granulobacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) | GRABC01004 | Q0BTF0 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) | RHORT01815 | Q2RTC3 | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Ehrlichia canis (strain Jake) | EHRCJ00287 | Q3YSG6 | Riboflavin synthase |
| [B] Ehrlichia chaffeensis (strain Arkansas) | EHRCR00739 | Q2GG52 | 6,7-dimethyl-8-ribityllumazine synthase identified by similarity to SP:P51963; match to protein family HMM PF00885; match to protein family HMM TIGR00114 |
| [B] Wolbachia pipientis subsp. Culex pipiens (strain wPip) | WOLPP00005 | RISB_WOLPP | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Wolbachia pipientis wMel | WOLPM00209 | RISB_WOLPM | Identified by similarity to EGAD:8483; match to PF00885 protein family HMM PF00885 riboflavin synthase, beta subunit |
| [B] Wolbachia sp. (subsp. Brugia malayi) (strain TRS) | WOLTR00188 | RISB_WOLTR | Riboflavin synthase beta-chain |
| [B] Wolbachia sp. subsp. Drosophila simulans (strain wRi) | WOLWR00175 | RISB_WOLWR | Riboflavin synthase subunit beta |
| [B] Erythrobacter litoralis (strain HTCC2594) | ERYLH01146 | RISB_ERYLH | riboflavin synthase beta-chain COG0054 Riboflavin synthase beta-chain |
| [B] Burkholderia pseudomallei (strain 1710b) | BURP103034 | Q3JPM7 | 6,7-dimethyl-8-ribityllumazine synthase identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114 |
| [B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) | BURTA01489 | Q2SYC4 | 6,7-dimethyl-8-ribityllumazine synthase identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114 |
| [B] Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) | CAMHC00029 | RISB_CAMHC | 6,7-dimethyl-8-ribityllumazine synthase |
| [B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) | CAMLR00506 | RISB_CAMLR | 6,7-dimethyl-8-ribityllumazine synthase |