List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 3869

Amylopullulanase
This group has 18 members: 18 [B]acteria
Fingerprint: THDTERI

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Arthrobacter aurescens (strain TC1)ARTAT00878  UniProtKB/TrEMBL A1R3A0  Alpha-amylase family protein
[B] Alkaliphilus metalliredigens (strain QYMF)ALKMQ02708  UniProtKB/TrEMBL A6TSC6  Alpha amylase, catalytic region
[B] Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)CLOB804805  UniProtKB/TrEMBL A6M332  Alpha amylase, catalytic region
[B] Clostridium botulinum (strain Alaska E43 / type E3)CLOBA03065  UniProtKB/TrEMBL B2V047  Amylopullulanase
[B] Clostridium botulinum (strain Eklund 17B / type B)CLOBB03325  UniProtKB/TrEMBL B2TR26  Amylopullulanase
[B] Clostridium difficile (strain 630)CLOD600903  UniProtKB/TrEMBL Q18A77  putative alpha-amylase
[B] Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)CLOK503332  UniProtKB/TrEMBL A5N2Z0  Apu
[B] Clostridium perfringensCLOPE00066  UniProtKB/TrEMBL Q8XP99  Amylopullulanase
[B] Desulfotomaculum reducens (strain MI-1)DESRM01390  UniProtKB/TrEMBL A4J4I5  Alpha amylase, catalytic region
[B] Lactobacillus acidophilusLACAC00652  UniProtKB/TrEMBL Q5FL63  amylopullulanase
[B] Lactobacillus casei (strain ATCC 334)LACC301869  UniProtKB/TrEMBL Q036T2  amylopullulanase
[B] Lactobacillus casei (strain BL23)LACCB02098  UniProtKB/TrEMBL B3W999  Alpha-amylase
[B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081)LACDA01636   LACDA_A.1702  pseudo Putative alpha-amylase (fragment)
[B] Lactobacillus plantarumLACPL00023  UniProtKB/TrEMBL Q890I6  alpha-amylase
[B] Lactobacillus salivarius subsp. salivarius (strain UCC118)LACS101264  UniProtKB/TrEMBL Q1WSN3  Alpha-amylase COG0366 [G] Glycosidases
[B] Lactococcus lactis subsp. cremoris (strain MG1363)LACLM01771  UniProtKB/TrEMBL A2RMB2  Amylopullulanase
[B] Lactococcus lactis subsp. cremoris (strain SK11)LACLS00631  UniProtKB/TrEMBL Q030T2  amylopullulanase
[B] Lactococcus lactis subsp. lactisLACLA00683  UniProtKB/TrEMBL Q9CHM7  Amylopullulanase