List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 331071

alpha-galactosidase
This group has 2 members: 2 [B]acteria
Fingerprint: TEYRTHF

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Phytoplasma sp. (strain STRAWB1)STRAW01474  UniProtKB/TrEMBL Q82N28  Putative alpha-galactosidase
[B] Streptomyces coelicolorSTRCO00271  UniProtKB/TrEMBL Q9S2C9  SCF85.12, possible secreted alpha-galactosidase, len: 680 aa. Highly similar to many Eukaryotic alpha-galactosidases over the first 415 aa, e.g. Coffea arabica (Coffee) alpha-galactosidase precursor (EC 3.2.1.22) (melibiase) (378 aa),opt: 1323 z-score: 1416.9 E(): 0; 54.5% identity in 354 aa overlap, in addition to Saccharopolyspora erythraea (Streptomyces erythraeus)alpha galactosidase precursor MelA (428 aa),fasta scores opt: 623 z-score: 668.6 E(): 6.9e-30 50.6% identity in 427 aa overlap. Contains a PS00512 Alpha-galactosidase signature, a PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site and a possible N-terminal signal sequence probable secreted alpha-galactosidase