List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 210179

3-phosphoshikimate 1-carboxyvinyltransferase
This group has 7 members: 7 [B]acteria
Fingerprint: ACILPNS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacillus weihenstephanensis (strain KBAB4)BACWK01421  UniProtKB/TrEMBL A9VMC8  3-phosphoshikimate 1-carboxyvinyltransferase
[B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)CLOPH02500  UniProtKB/TrEMBL A9KME7  3-phosphoshikimate 1-carboxyvinyltransferase
[B] Streptococcus equi subsp. zooepidemicus (strain MGCS10565)STREM00665  UniProtKB/Swiss-Prot AROA_STREM  3-phosphoshikimate 1-carboxyvinyltransferase AroA
[B] Ehrlichia canis (strain Jake)EHRCJ00187  UniProtKB/TrEMBL Q3YSR6  3-phosphoshikimate 1-carboxyvinyl transferase
[B] Geobacter uraniumreducens (strain Rf4)GEOUR01404  UniProtKB/Swiss-Prot AROA_GEOUR  3-phosphoshikimate 1-carboxyvinyltransferase
[B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060)CAMLR01146  UniProtKB/TrEMBL B9KD75  3-phosphoshikimate 1-carboxyvinyltransferase
[B] Legionella pneumophila (strain Corby)LEGPC00810  UniProtKB/Swiss-Prot AROA_LEGPC  3-phosphoshikimate 1-carboxyvinyltransferase