List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 191180

D-isomer specific 2-hydroxyacid dehydrogenase
This group has 9 members: 3 [E]ukaryota 1 [A]rchaea 5 [B]acteria
Fingerprint: TEDWGET

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Populus trichocarpaPOPTR41231  UniProtKB/TrEMBL B9H1J0  jgi|Poptr1_1|818203|estExt_fgenesh4_pg.C_LG_IV1470 [DNA did not match protein] [DNA partly invalid]
[E] Arabidopsis thalianaARATH05506  UniProtKB/TrEMBL Q9C9W5  glycerate dehydrogenase / NADH-dependent hydroxypyruvate reductase, identical to hydroxypyruvate reductase (HPR) GB:D85339 (Arabidopsis thaliana) (Plant Cell Physiol 1997 Apr;38(4):449-55); go_component: peroxisome [goid GO:0005777@[IDA]; GO:0008266@[IDA]; GO:0008465@[NAS]; GO:0009507@[IDA]; GO:0009853@[TAS]; GO:0048046@[IDA]] [evidence IDA] [pmid 9177031]; go_function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [goid GO:0016616] [evidence IEA]; go_process: photorespiration [goid GO:0009853] [evidence TAS] [pmid 9177031] HPR; oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor
[E] Vitis viniferaVITVI18960  UniProtKB/TrEMBL A7P8C8  
[A] Korarchaeum cryptofilum (strain OPF8)KORCO01534  UniProtKB/Swiss-Prot GYAR_KORCO  Glyoxylate reductase
[B] Arthrobacter aurescens (strain TC1)ARTAT03965  UniProtKB/TrEMBL A1RC54  Glyoxylate reductase
[B] Moorella thermoacetica (strain ATCC 39073)MOOTA01897  UniProtKB/TrEMBL Q2RH37  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[B] Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)THEP300557  UniProtKB/TrEMBL B0K7B2  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[B] Thermoanaerobacter sp. (strain X514)THEPX01036  UniProtKB/TrEMBL B0K6A1  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[B] Desulfatibacillum alkenivorans (strain AK-01)DESAA02252  UniProtKB/TrEMBL B8FIJ7  Glyoxylate reductase