List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 267491

Glycoside hydrolase 15-related
This group has 4 members: 1 [A]rchaea 3 [B]acteria
Fingerprint: SSKVLCW

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Sulfolobus tokodaiiSULTO01049  UniProtKB/TrEMBL Q973C0  hypothetical protein
[B] Salinispora arenicola (strain CNS-205)SALAI00955  UniProtKB/TrEMBL A8M4G8  Glycoside hydrolase 15-related
[B] Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO01076  UniProtKB/TrEMBL A4X3W3  Glycoside hydrolase 15-related
[B] Streptomyces coelicolorSTRCO03422  UniProtKB/TrEMBL Q8CJW6  SCE46.01c, hypothetical protein (partial CDS), len: >38 aa ;similar to TR:CAB52841 (EMBL:AL109848) Streptomyces coelicolor hypothetical 68.4 kD protein; fasta scores: opt: 152 z-score: 252.5 E(): 1e-06; 52.8% identity in 36 aa overlap SCE36.11c, partial CDS, conserved hypothetical protein, len: 612aa; similar to TR:P71741 (EMBL:Z81368) hypothetical protein from Mycobacterium tuberculosis (642 aa) fasta scores; opt: 1283, z-score: 1479.1, E(): 0, (41.9% identity in 623 aa overlap) and SW:YAY3_SCHPO hypothetical protein from Schizosaccharomyces pombe (649 aa) fasta scores; opt: 883, z-score: 1017.4, E(): 0, (33.1% identity in 634 aa overlap). conserved hypothetical protein