List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 240478

go_process: aromatic amino acid family biosynthesis
This group has 23 members: 23 [E]ukaryota
Fingerprint: SRRIHFG

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Phaeosphaeria nodorumPHANO02316  UniProtKB/TrEMBL Q0U2T2  hypothetical protein
[E] Aspergillus fumigatusASPFU05342  UniProtKB/TrEMBL Q4WVS3  go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_function: chorismate mutase activity [goid 0004106]; go_process: aromatic amino acid family biosynthesis [goid 0009073] chorismate mutase
[E] Botrytis cinereaBOTFB09347  UniProtKB/TrEMBL A6S4C4  Botrytis cinerea hypothetical protein
[E] Magnaporthe griseaMAGGR03949  UniProtKB/TrEMBL A4RJV4  Magnaporthe grisea hypothetical protein
[E] Yarrowia lipolyticaYARLI00719  UniProtKB/TrEMBL Q6C5J7  similar to sp|P32178 Saccharomyces cerevisiae YPR060c ARO7 chorismate mutase, start by similarity
[E] Ashbya gossypiiASHGO01052  UniProtKB/TrEMBL Q75BG5  Syntenic homolog of Saccharomyces cerevisiae YPR060C (ARO7) ADL326Wp
[E] Kluyveromyces lactisKLULA04420  UniProtKB/TrEMBL Q6CVY3  highly similar to sp|P32178 Saccharomyces cerevisiae YPR060c ARO7 chorismate mutase singleton, start by similarity
[E] Lodderomyces elongisporusLODEL00886  UniProtKB/TrEMBL A5DU51  Lodderomyces elongisporus (LELG_00887.1) chorismate mutase (translation)
[E] Pichia stipitisPICST03816  UniProtKB/TrEMBL A3LWZ3  ARO7 Chorismate mutase; go_function: chorismate mutase activity; go_process: aromatic amino acid family biosynthesis
[E] Saccharomyces cerevisiaeYEAST02564  UniProtKB/Swiss-Prot CHMU_YEAST  Chorismate mutase
[E] Schizosaccharomyces pombeSCHPO01489  UniProtKB/Swiss-Prot CHMU_SCHPO  chorismate mutase (predicted); similar to S. cerevisiae YPR060C
[E] Laccaria bicolorLACBI01284   estExt_Genewise1_worm.C_30330  jgi|Lacbi1|177156|estExt_Genewise1_worm.C_30330
[E] Cryptococcus neoformansCRYNE05834  UniProtKB/TrEMBL Q5K7Y8  go_component: nucleus [goid 0005634]; go_component: cytoplasm [goid 0005737]; go_function: chorismate mutase activity [goid 0004106]; go_process: aromatic amino acid family biosynthesis [goid 0009073] chorismate mutase, putative
[E] Ustilago maydisUSTMA04214  UniProtKB/TrEMBL Q4P6P3  ustilago_maydis hypothetical protein
[E] Debaryomyces hanseniiDEBHA05057  UniProtKB/TrEMBL B5RUN3  DEHA2F24530p;similar to uniprot|P32178 Saccharomyces cerevisiae YPR060C ARO7 Chorismate mutase;
[E] Candida glabrataCANGA03526  UniProtKB/TrEMBL Q6FLZ7  highly similar to uniprot|P32178 Saccharomyces cerevisiae YPR060c ARO7 chorismate mutase;
[E] Candida albicansCANAL00274  UniProtKB/TrEMBL Q59TS4  chorismate mutase;
[E] Ostreococcus lucimarinusOSTLU03964  UniProtKB/TrEMBL A4S1M4  predicted protein go_function: chorismate mutase activity; go_process: aromatic amino acid family biosynthesis
[E] Oryza sativaORYSA02586   BAF06255.1  Chorismate mutase, chloroplast precursor (EC 5.4.99.5) (CM-1) contains InterPro domain(s): IPR008238, IPR002701 has GO asignment(s): GO:0004106, GO:0009073 similar to P42738 supported by AK068983
[E] Sorghum bicolorSORBI32927  UniProtKB/TrEMBL C5XKW2  jgi|Sorbi1|5053762|Sb03g035460
[E] Populus trichocarpaPOPTR05545   gw1.XVII.1275.1  jgi|Poptr1_1|259284|gw1.XVII.1275.1
[E] Arabidopsis thalianaARATH05645  UniProtKB/TrEMBL Q9C544  chorismate mutase, putative, similar to gi:5732016 and SP|P42738; contains Pfam profile: PF01817: Chorismate mutase; go_component: plastid [goid GO:0009536] [evidence TAS] [pmid 10564818]; go_function: chorismate mutase activity [goid GO:0004106] [evidence IGI] [pmid 8224252]; go_function: chorismate mutase activity [goid GO:0004106] [evidence IGI] [pmid 8953244]; go_process: aromatic amino acid family biosynthesis, shikimate pathway [goid GO:0016089] [evidence TAS] [pmid 8224252]; go_process: aromatic amino acid family biosynthesis, shikimate pathway [goid GO:0016089] [evidence TAS] [pmid 8953244]; go_process: aromatic amino acid family biosynthesis, anthranilate pathway [goid GO:0009096] [evidence IDA] [pmid 10564818]; go_process: response to biotic stimulus [goid GO:0009607] [evidence IEP] [pmid 10564818] CM3 (CHORISMATE MUTASE 3); chorismate mutase
[E] Vitis viniferaVITVI13248  UniProtKB/TrEMBL A7PN83