List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 185042

Glycoside Hydrolase Family 43
This group has 10 members: 10 [B]acteria
Fingerprint: SPVNGPH

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Arthrobacter aurescens (strain TC1)ARTAT00229  UniProtKB/TrEMBL A1R1F0  Xylosidase/arabinosidase
[B] Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360)ARTCA00496  UniProtKB/TrEMBL B8HAN9  Glycoside hydrolase family 43
[B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG00088  UniProtKB/TrEMBL B1VNM0  Putative xylanase
[B] Bacteroides thetaiotaomicronBACTN04139  UniProtKB/TrEMBL Q8A036  Xylosidase/arabinosidase
[B] Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)BACV801854  UniProtKB/TrEMBL A6L1U1  Glycoside hydrolase family 43, candidate beta- xylosidase/alpha-L-arabinofuranosidase
[B] Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)FLAJ104218  UniProtKB/TrEMBL A5FC13  Glycoside hydrolase, family 43
[B] Bacillus licheniformis (strain DSM 13 / ATCC 14580)BACLD00804  UniProtKB/TrEMBL Q65MB7  InterProMatches:IPR006710; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolism (GO:0005975) Glycoside Hydrolase Family 43
[B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)CLOPH02591  UniProtKB/TrEMBL A9KMY2  Glycoside hydrolase family 43
[B] Cellvibrio japonicus (strain Ueda107)CELJU03493  UniProtKB/TrEMBL B3PH06  Beta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43I
[B] Opitutus terrae (strain DSM 11246 / PB90-1)OPITP04252  UniProtKB/TrEMBL B1ZP73  Glycoside hydrolase family 43 precursor