List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 274328

This group has 5 members: 3 [E]ukaryota 2 [B]acteria
Fingerprint: SLECEEN

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Canis familiarisCANFA13923  Ensembl ENSCAFP00000034806   -
[E] Daphnia pulexDAPPU07942   e_gw1.72.116.1  jgi|Dappu1|58299|e_gw1.72.116.1
[E] Nematostella vectensisNEMVE07009  UniProtKB/TrEMBL A7S0A3  jgi|Nemve1|99846|e_gw.54.127.1
[B] Bacteroides fragilisBACFR04023  UniProtKB/TrEMBL Q64NZ7  similar to gp:AB023627_1 [Danio rerio], percent identity 31 in 256 aa, BLASTP E(): 1e-26 putative alpha-1,3-fucosyltransferase
[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN03709  UniProtKB/TrEMBL Q5L8T7  Only similar to eukaryotic database entries such as Macaca mulatta Lewis alpha-3-fucosyltransferase Fut3'RH SWALL:Q8WNP0 (EMBL:AF345883) (372 aa) fasta scores: E(): 1.7e-17, 30.07% id in 286 aa, and Homo sapiens alpha-(1,3)-fucosyltransferase Fut6 or Fct3A SWALL:FUT6_HUMAN (SWALL:P51993) (359 aa) fasta scores: E(): 3.3e-16, 29.22% id in 308 aa putative fucosyltransferase