List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 206970

Arabinogalactan endo-1,4-beta-galactosidase
This group has 12 members: 12 [B]acteria
Fingerprint: MICEIGM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacteroides thetaiotaomicronBACTN04621  UniProtKB/TrEMBL Q89YR3  Arabinogalactan endo-1,4-beta-galactosidase
[B] Bacillus amyloliquefaciens (strain FZB42)BACA201126  UniProtKB/TrEMBL A7Z3J9  GanA
[B] Clostridium acetobutylicumCLOAB02530  UniProtKB/TrEMBL Q97G04  Predicted arabinogalactan endo-1,4-beta-galactosidase
[B] Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE02008  UniProtKB/TrEMBL B8I434  glycosyl hydrolase 53 domain protein PFAM: cellulosome protein dockerin type I; glycosyl hydrolase 53 domain protein; KEGG: cth:Cthe_1400 glycosyl hydrolase 53
[B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237)CLOTH01354  UniProtKB/TrEMBL A3DFA2  Glycosyl hydrolase 53 precursor
[B] Aeromonas salmonicida (strain A449)AERS402134  UniProtKB/TrEMBL A4SNG0  Arabinogalactan endo-1,4-beta-galactosidase
[B] Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)SACD203687  UniProtKB/TrEMBL Q21EB4  Arabinogalactan endo-1,4-beta-galactosidase
[B] Cellvibrio japonicus (strain Ueda107)CELJU00479  UniProtKB/TrEMBL B3PIY1  Arabinogalactan endo-1,4-beta-galactosidase, putative, gal53B
[B] Xanthomonas axonopodis (pv. citri)XANAC00565  UniProtKB/TrEMBL Q8PPV8  identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark arabinogalactan endo-1,4-beta-galactosidase
[B] Xanthomonas campestris pv. campestrisXANCP03521  UniProtKB/TrEMBL Q8P4T2  Arabinogalactan endo-1,4-beta-galactosidase
[B] Xanthomonas campestris pv. campestris (strain 8004)XANC800566  UniProtKB/TrEMBL Q4UZ55  arabinogalactan endo-1,4-beta-galactosidase
[B] Xanthomonas campestris pv. campestris (strain B100)XANCB00599  UniProtKB/TrEMBL B0RNA4  Exported arabinogalactan endo-1,4-beta- galactosidase