List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 218908

Alpha-mannosidase
This group has 9 members: 7 [E]ukaryota 2 [B]acteria
Fingerprint: SHIDSAW

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Otolemur garnettiiOTOGA12027  Ensembl ENSOGAP00000000136   -
[E] Ochotona princepsOCHPR05567  Ensembl ENSOPRP00000004131   -
[E] Spermophilus tridecemlineatusSPETR04063  Ensembl ENSSTOP00000005206   -
[E] Ashbya gossypiiASHGO02548  UniProtKB/TrEMBL Q74Z21  Syntenic homolog of Saccharomyces cerevisiae YGL156W (AMS1) AGR385Cp
[E] Saccharomyces cerevisiaeYEAST00820  UniProtKB/Swiss-Prot MAN1_YEAST  Alpha-mannosidase
[E] Ustilago maydisUSTMA00557  UniProtKB/TrEMBL Q4PH56  ustilago_maydis hypothetical protein
[E] Candida glabrataCANGA01129  UniProtKB/TrEMBL Q6FV32  highly similar to uniprot|P22855 Saccharomyces cerevisiae YGL156w AMS1 alpha-mannosidase;
[B] Bifidobacterium longumBIFLO00165  UniProtKB/TrEMBL Q8G4P9  Alpha-mannosidase
[B] Bifidobacterium longum (strain DJO10A)BIFLD00184  UniProtKB/TrEMBL B3DQP1  Alpha-mannosidase