List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 25787

identified by sequence similarity; putative
This group has 5 members: 5 [B]acteria
Fingerprint: SDQIRMY

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Chlamydia muridarumCHLMU00426  UniProtKB/TrEMBL Q9PKM8  similar to GP:6013469; identified by sequence similarity; putative adherence factor
[B] Chlamydophila caviaeCHLCV00548  UniProtKB/TrEMBL Q822X0  This protein has a UDP-glucose binding domain and a glycosyltransferase domain. See PMID: 9677381 and PMID: 10788427.; similar to GP:7190483; identified by sequence similarity; putative putative cytotoxin
[B] Chlamydophila felis (strain Fe/C-56)CHLFF00442  UniProtKB/TrEMBL Q254S4  adherence factor
[B] Escherichia coli O157:H7ECO5705197  UniProtKB/TrEMBL B3AEW7  22 pct identical (44 gaps) to 444 residues of an approx. 2364 aa protein Clostridium sordellii cytotoxin L TRSW: Q46342 putative cytotoxin
[B] Escherichia coli O157:H7 (strain EC4115 / EHEC)ECO5E05163  UniProtKB/TrEMBL B5YPG3  Glycosyltransferase sugar-binding region containing DXD motif family protein