List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 21601

FAD-dependent pyridine nucleotide-disulphide oxidoreductase
This group has 6 members: 6 [B]acteria
Fingerprint: SHAGICA

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Clostridium tetaniCLOTE02241  UniProtKB/TrEMBL Q890W4  NADH dehydrogenase, similar to nitrite reductase
[B] Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)NATTJ00100  UniProtKB/TrEMBL B2A3S5  FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[B] Lactococcus lactis subsp. cremoris (strain MG1363)LACLM02303   LACLM_Chromosome.2366  
[B] Lactococcus lactis subsp. cremoris (strain SK11)LACLS02171  UniProtKB/TrEMBL Q02VZ8  Uncharacterized NAD(FAD)-dependent dehydrogenase
[B] Lactococcus lactis subsp. lactisLACLA02081  UniProtKB/TrEMBL Q9CDT5  NADH oxidase
[B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB04874  UniProtKB/TrEMBL B1ZM03  FAD-dependent pyridine nucleotide-disulphide oxidoreductase