List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 43495

family 39
This group has 13 members: 13 [B]acteria
Fingerprint: RYALNNI

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Corynebacterium glutamicumCORGL01576  UniProtKB/TrEMBL Q8NRZ6  Dolichyl-phosphate-mannose--protein O-mannosyl transferase PMT1
[B] Corynebacterium glutamicum (strain R)CORGB01017  UniProtKB/TrEMBL A4QCN2  Hypothetical protein
[B] Nocardia farcinicaNOCFA04917  UniProtKB/TrEMBL Q5YPX8  hypothetical protein
[B] Arthrobacter sp. (strain FB24)ARTS204202  UniProtKB/TrEMBL A0AW40  glycosyl transferase, family 39 PFAM: glycosyl transferase, family 39 KEGG: sma:SAV3592 integral membrane protein
[B] Cyanothece (strain ATCC 51142)CYAA502013  UniProtKB/TrEMBL B1X1F4  Putative uncharacterized protein
[B] Cyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP401772  UniProtKB/TrEMBL B8HTG7  Glycosyl transferase family 39
[B] Microcystis aeruginosa (strain NIES-843)MICAN02261  UniProtKB/TrEMBL B0JHA2  Glycosyl transferase family 39
[B] Synechocystis sp. (strain PCC 6803)SYNY300451  UniProtKB/TrEMBL P73015  Slr1050 protein
[B] Thermosynechococcus elongatus (strain BP-1)THEEB02408  UniProtKB/TrEMBL Q8DG86  Tlr2437 protein
[B] Anabaena sp. (strain PCC 7120)ANASP03118  UniProtKB/TrEMBL Q8YSD8  Alr3150 protein
[B] Trichodesmium erythraeum (strain IMS101)TRIEI00723  UniProtKB/TrEMBL Q117P9  Glycosyl transferase, family 39
[B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB02061  UniProtKB/TrEMBL A5EDZ2  Hypothetical protein
[B] Bradyrhizobium sp. (strain ORS278)BRASO01780  UniProtKB/TrEMBL A4YPD3  Hypothetical protein