List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 330467

Putative glycosyl hydrolase
This group has 8 members: 2 [E]ukaryota 6 [B]acteria
Fingerprint: RVIAPGH

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Phaeosphaeria nodorumPHANO12984  UniProtKB/TrEMBL Q0UZ42  hypothetical protein
[E] Botrytis cinereaBOTFB13855  UniProtKB/TrEMBL A6SKX5  Botrytis cinerea hypothetical protein
[B] Frankia alni (strain ACN14a)FRAAA01663  UniProtKB/TrEMBL Q0RQ10  putative glycosyl hydrolase Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme
[B] Frankia sp. (strain EAN1pec)FRASN06792  UniProtKB/TrEMBL A8L3R0  Glucan endo-1,3-beta-D-glucosidase precursor
[B] Saccharopolyspora erythraea (strain NRRL 23338)SACEN02010  UniProtKB/TrEMBL A4FBF1  Glycosyl hydrolase
[B] Phytoplasma sp. (strain STRAWB1)STRAW00965  UniProtKB/TrEMBL Q82PF4  Putative glycosyl hydrolase
[B] Streptomyces coelicolorSTRCO00700  UniProtKB/TrEMBL Q9L2J3  SCF42.26, possible glycosyl hydrolase (putative secreted protein), len: 400 aa. Similar to several including: Arthrobacter sp. (strain YCWD3) SW:E13B_ARTSP(EMBL:D23668) glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) (548 aa), fasta scores opt: 425 z-score: 452.8 E(): 7.8e-18 34.5% identity in 414 aa overlap and Streptomyces matensis TR:Q9Z4I2(EMBL:AB019428) laminaripentaose-producing beta-1,3-guluase (lphase) precursor (401 aa), fasta scores opt: 477 z-score: 509.6 E(): 5.4e-21 38.7% identity in 413 aa overlap. Contains a possible N-terminal signal sequence putative glycosyl hydrolase (putative secreted protein)
[B] Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG01819  UniProtKB/TrEMBL B1VZ20  Putative uncharacterized protein