List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 40719

Tetratricopeptide TPR_2 repeat protein
This group has 8 members: 8 [B]acteria
Fingerprint: LIFAPRV

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Caulobacter crescentusCAUCR03669  UniProtKB/TrEMBL Q9A248  TPR domain protein
[B] Methylobacterium sp. (strain 4-46)METS400671  UniProtKB/TrEMBL B0U7H7  Tetratricopeptide TPR_2 repeat protein
[B] Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)XANP200419  UniProtKB/TrEMBL A7ICG7  Tetratricopeptide TPR_2 repeat protein
[B] Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)RHOS104006  UniProtKB/TrEMBL A3PS31  Tetratricopeptide TPR_2 repeat protein PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein SMART: Tetratricopeptide domain protein KEGG: neu:NE2092 glycosyl transferase group 1:TPR repeat
[B] Rhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK04530  UniProtKB/TrEMBL B9KXA7  O-linked acetylglucosamine transferase
[B] Ralstonia eutropha (strain JMP134)RALEJ00767  UniProtKB/TrEMBL Q474N1  TPR repeat
[B] Stenotrophomonas maltophilia (strain K279a)STRMK00812  UniProtKB/TrEMBL B2FQ13  Putative TPR domain protein
[B] Stenotrophomonas maltophilia (strain R551-3)STRM500719  UniProtKB/TrEMBL B4SKS7  Tetratricopeptide TPR_2 repeat protein