List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 8855

succinate lyase
This group has 7 members: 7 [B]acteria
Fingerprint: RSRNDIG

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacillus clausii (strain KSM-K16)BACSK01475  UniProtKB/Swiss-Prot ARLY1_BACSK  arginosuccinase argininosuccinate lyase
[B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)AZOC503862  UniProtKB/TrEMBL A8IK84  Argininosuccinate lyase
[B] Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)RHOS403938  UniProtKB/TrEMBL Q3IVC5  Citation: Smith, D. R. et. al. (1997) J. Bacteriol. 179: 7135-7155. Arginino succinate lyase
[B] Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS503493  UniProtKB/TrEMBL A4WYP6  Putative uncharacterized protein
[B] Rhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK04305  UniProtKB/TrEMBL B9KWN1  Arginino succinate lyase
[B] Cupriavidus taiwanensis (strain R1 / LMG 19424)CUPTR04981  UniProtKB/TrEMBL B3RC54  Argininosuccinate lyase
[B] Polaromonas sp. (strain JS666 / ATCC BAA-500)POLSJ04294  UniProtKB/TrEMBL Q123L8  argininosuccinate lyase