| [E] Ostreococcus lucimarinus | OSTLU02995 | A4RYV6 | predicted protein go_function: DNA binding; DNA topoisomerase type I activity; nucleic acid binding; go_process: DNA topological change; DNA unwinding; DNA modification |
| [B] Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) | ACIC503242 | C1F6V0 | DNA topoisomerase |
| [B] Solibacter usitatus (strain Ellin6076) | SOLUE02353 | Q01N68 | DNA topoisomerase I KEGG: aba:Acid345_3340 DNA topoisomerase TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein |
| [B] Symbiobacterium thermophilum | SYMTH01457 | Q67PC7 | DNA topoisomerase I |
| [B] Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) | FLAPJ01918 | A6H115 | DNA topoisomerase I |
| [B] Chlamydia muridarum | CHLMU00012 | Q9PLT3 | identified by match to PFAM protein family HMM PF03234 DNA topoisomerase I |
| [B] Chlamydia trachomatis | CHLTR00660 | O84649 | DNA Topoisomerase I-Fused to SWI Domain |
| [B] Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) | CHLTA00671 | Q3KL52 | DNA topoisomerase I |
| [B] Chlamydia trachomatis (strain L2/434/Bu / ATCC VR902B) | CHLT200011 | B0B8L8 | DNA topoisomerase I |
| [B] Chlamydia trachomatis (strain L2b/UCH-1/proctitis) | CHLTB00011 | B0BA97 | DNA topoisomerase I |
| [B] Parachlamydia sp. (strain UWE25) (subsp. Acanthamoeba sp.) | PARUW00071 | Q6MF54 | similar to DNA topoisomerase I putative DNA topoisomerase I |
| [B] Chlorobium tepidum | CHLTE00055 | Q8KGB3 | DNA topoisomerase |
| [B] Chlorobium chlorochromatii (strain CaD3) | CHLCH00075 | Q3ANX7 | DNA topoisomerase I |
| [B] Chlorobium limicola (strain DSM 245 / NBRC 103803) | CHLL202331 | B3EIE2 | DNA topoisomerase I |
| [B] Chlorobium phaeobacteroides (strain DSM 266) | CHLPD00095 | A1BCQ2 | DNA topoisomerase I KEGG: cte:CT0055 DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein |
| [B] Prosthecochloris vibrioformis (strain DSM 265) | PROVI01692 | A4SGW5 | DNA topoisomerase I KEGG: plt:Plut_2073 DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein |
| [B] Chloroherpeton thalassium (strain ATCC 35110 / GB-78) | CHLT300432 | B3QUJ8 | DNA topoisomerase I |
| [B] Pelodictyon luteolum (strain DSM 273) | PELLD02014 | Q3B166 | DNA topoisomerase I |
| [B] Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) | PELPB02607 | B4SH00 | DNA topoisomerase I |
| [B] Prosthecochloris aestuarii (strain DSM 271 / SK 413) | PROA202141 | B4S6B2 | DNA topoisomerase I |
| [B] Chloroflexus aggregans (strain MD-66 / DSM 9485) | CHLAD01301 | B8G8J2 | DNA topoisomerase I |
| [B] Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) | CHLSY04136 | B9LHB5 | DNA topoisomerase I |
| [B] Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) | CHLAA03833 | A9WDH5 | DNA topoisomerase I |
| [B] Dehalococcoides ethenogenes (strain 195) | DEHE100624 | Q3Z8J1 | identified by similarity to SP:P39814; match to protein family HMM PF01131; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Dehalococcoides sp. (strain BAV1) | DEHSB00631 | A5FRD9 | DNA topoisomerase I |
| [B] Dehalococcoides sp. (strain CBDB1) | DEHSC00560 | Q3ZX75 | DNA topoisomerase I |
| [B] Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) | THET201918 | Q72GB7 | DNA topoisomerase |
| [B] Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) | THET800074 | Q5SM69 | DNA topoisomerase |
| [B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) | DICT601348 | B5YFC7 | DNA topoisomerase I |
| [B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724) | DICTD01458 | B8E2F6 | DNA topoisomerase I |
| [B] Bacillus amyloliquefaciens (strain FZB42) | BACA201509 | A7Z4N2 | TopA |
| [B] Bacillus anthracis | BACAN03635 | B0AYL1 | identified by match to TIGR protein family HMM TIGR01054 DNA topoisomerase I |
| [B] Bacillus cereus (strain AH187) | BACC703671 | B7HLG6 | DNA topoisomerase I |
| [B] Bacillus cereus (strain ATCC 10987) | BACC103835 | Q732N7 | identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Bacillus cereus (strain G9842) | BACC203832 | B7IUJ2 | DNA topoisomerase I |
| [B] Bacillus cereus (strain ZK) | BACCZ03555 | Q636J3 | DNA topoisomerase I |
| [B] Bacillus cereus subsp. cytotoxis (strain NVH 391-98) | BACCN02341 | A7GRG3 | DNA topoisomerase I |
| [B] Bacillus clausii (strain KSM-K16) | BACSK02266 | Q5WFP7 | DNA topoisomerase IA TopA |
| [B] Bacillus halodurans | BACHD02426 | TOP1_BACHD | DNA topoisomerase I |
| [B] Bacillus licheniformis (strain DSM 13 / ATCC 14580) | BACLD01718 | Q62V42 | InterProMatches:IPR005733; DNA unwinding protein removing negative supercoils,Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase type I activity (GO:0003917), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265), Biological Process: DNA unwinding (GO:0 DNA topoisomerase I |
| [B] Bacillus pumilus (strain SAFR-032) | BACP201490 | A8FD76 | DNA topoisomerase TopA |
| [B] Bacillus subtilis | BACSU01611 | TOP1_BACSU | DNA topoisomerase I |
| [B] Bacillus thuringiensis (strain Al Hakam) | BACAH03273 | A0RHK6 | DNA topoisomerase I |
| [B] Bacillus thuringiensis (subsp. konkukian) | BACHK03513 | Q6HEY2 | Structural feature(s) predicted by Psort:Transmembrane: 3671550 - 3671534 DNA topoisomerase I |
| [B] Bacillus weihenstephanensis (strain KBAB4) | BACWK03558 | A9VT71 | DNA topoisomerase I |
| [B] Geobacillus kaustophilus | GEOKA01200 | Q5L0N4 | DNA topoisomerase I (omega-protein) (relaxing enzyme) (untwisting enzyme) |
| [B] Geobacillus thermodenitrificans (strain NG80-2) | GEOTN01041 | A4IM86 | DNA Topoisomerase I |
| [B] Oceanobacillus iheyensis | OCEIH01543 | Q8EQY8 | CDS_ID OB1546 DNA topoisomerase I |
| [B] Listeria monocytogenes | LISMO01271 | Q8Y7K2 | highly similar to DNA topoisomerase I TopA |
| [B] Listeria monocytogenes (serotype 4b / strain F2365) | LISMF01277 | Q720E6 | identified by similarity to SP:P39814; match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Listeria monocytogenes serotype 4a (strain HCC23) | LISMH01279 | B8DG56 | DNA topoisomerase I |
| [B] Listeria monocytogenes serotype 4b (strain Clip81459) | LISMC01259 | C1L2I3 | Putative DNA topoisomerase I TopA |
| [B] Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) | LISW601292 | A0AI78 | TopA protein |
| [B] Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) | BREBN03432 | C0ZFB0 | DNA topoisomerase I |
| [B] Staphylococcus aureus (strain COL) | STAAC01235 | TOP1_STAAC | identified by similarity to EGAD:20536; match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Staphylococcus aureus (strain JH1) | STAA201297 | A6U168 | DNA topoisomerase I KEGG: sam:MW1133 DNA topoisomerase I topA homolog TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein |
| [B] Staphylococcus aureus (strain JH9) | STAA901273 | A5ISD4 | DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein |
| [B] Staphylococcus aureus (strain MRSA252) | STAAR01188 | TOP1_STAAR | Similar to Bacillus subtilis DNA topoisomerase I TopA SW:TOP1_BACSU (P39814) (691 aa) fasta scores: E(): 3.7e-177, 67.873% id in 691 aa, and to Bacillus halodurans DNA topoisomerase I BH2467 SW:TOP1_BACHD (Q9KA23) (690 aa) fasta scores: E(): 2.7e-176, 67.344% id in 689 aa DNA topoisomerase I |
| [B] Staphylococcus aureus (strain MSSA476) | STAAS01189 | TOP1_STAAS | Ortholog of S. aureus MRSA252 (BX571856) SAR1226 DNA topoisomerase I |
| [B] Staphylococcus aureus (strain MW2) | STAAW01133 | NP_645950.1 | probable phosphoesterase |
| [B] Staphylococcus aureus (strain Mu3 / ATCC 700698) | STAA101225 | A7X1M5 | DNA topoisomerase I topA homologue |
| [B] Staphylococcus aureus (strain Mu50 / ATCC 700699) | STAAM01244 | TOP1_STAAM | DNA topoisomerase I topA homologue |
| [B] Staphylococcus aureus (strain N315) | STAAN01117 | TOP1_STAAN | DNA topoisomerase I topA homolog |
| [B] Staphylococcus aureus (strain NCTC 8325) | STAA801150 | ABD30326.1 | DNA topoisomerase I |
| [B] Staphylococcus aureus (strain Newman) | STAAE01118 | A6QGF0 | DNA topoisomerase |
| [B] Staphylococcus aureus (strain USA300 / TCH1516) | STAAT01150 | A8Z3T0 | DNA topoisomerase A |
| [B] Staphylococcus aureus (strain USA300) | STAA301116 | ABD21813.1 | DNA topoisomerase I identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 |
| [B] Staphylococcus aureus (strain bovine RF122) | STAAB01106 | CAI80801.1 | DNA topoisomerase I |
| [B] Staphylococcus epidermidis (strain ATCC 12228) | STAES00907 | TOP1_STAES | DNA topoisomerase I topA-like protein |
| [B] Staphylococcus epidermidis (strain ATCC 35984 / RP62A) | STAEQ00790 | TOP1_STAEQ | identified by similarity to EGAD:20536; match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Staphylococcus haemolyticus (strain JCSC1435) | STAHJ01618 | TOP1_STAHJ | DNA topoisomerase I |
| [B] Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) | STAS101516 | TOP1_STAS1 | similar to gi|27467844|ref|NP_764481.1| [Staphylococcus epidermidis ATCC 12228], percent identity 86 in 689 aa, BLASTP E(): 0.0 DNA topoisomerase IA |
| [B] Anaerocellum thermophilum (strain DSM 6725 / Z-1320) | ANATD02073 | B9MM33 | DNA topoisomerase I |
| [B] Clostridium acetobutylicum | CLOAB01761 | Q97I68 | Topoisomerase I |
| [B] Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) | CLOB801172 | A6LSN8 | DNA topoisomerase I |
| [B] Clostridium botulinum (strain ATCC 19397 / Type A) | CLOB102202 | A7FQ00 | DNA topoisomerase I |
| [B] Clostridium botulinum (strain Alaska E43 / type E3) | CLOBA01134 | B2V4F2 | DNA topoisomerase I |
| [B] Clostridium botulinum (strain Eklund 17B / type B) | CLOBB01188 | B2TJ38 | DNA topoisomerase I |
| [B] Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) | CLOBH02432 | A5I4L5 | DNA topoisomerase |
| [B] Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) | CLOBL02366 | A7GG25 | DNA topoisomerase I |
| [B] Clostridium botulinum (strain Loch Maree / Type A3) | CLOBM02414 | B1KWM7 | DNA topoisomerase I |
| [B] Clostridium botulinum (strain Okra / Type B1) | CLOBK02354 | B1II68 | DNA topoisomerase I |
| [B] Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) | CLOCE01944 | B8I3Q9 | DNA topoisomerase I KEGG: cth:Cthe_0460 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein |
| [B] Clostridium difficile (strain 630) | CLOD601276 | Q18BD6 | DNA topoisomerase I |
| [B] Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) | CLOK501360 | A5N826 | DNA topoisomerase |
| [B] Clostridium novyi (strain NT) | CLONN01239 | A0Q0S2 | DNA topoisomerase I identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 |
| [B] Clostridium perfringens | CLOPE01702 | Q8XJQ4 | DNA topoisomerase |
| [B] Clostridium perfringens (strain ATCC 13124 / NCTC 8237) | CLOP101912 | Q0TPQ1 | DNA topoisomerase I identified by similarity to SP:P39814; match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 |
| [B] Clostridium perfringens (strain SM101) | CLOPS01627 | Q0SSB8 | DNA topoisomerase I identified by similarity to SP:P39814; match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 |
| [B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) | CLOPH02681 | A9KNG6 | DNA topoisomerase I |
| [B] Clostridium tetani | CLOTE01092 | Q895L4 | DNA topoisomerase I |
| [B] Clostridium thermocellum (strain ATCC 27405 / DSM 1237) | CLOTH00443 | A3DCL9 | DNA topoisomerase I |
| [B] Finegoldia magna (strain ATCC 29328) | FINM200705 | B0S183 | DNA topoisomerase |
| [B] Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) | HELMI02078 | B0TH92 | DNA topoisomerase |
| [B] Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) | CARHZ01727 | Q3AB70 | identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Desulfitobacterium hafniense (strain Y51) | DESHY02521 | Q24UE9 | hypothetical protein similarity to COG0550 Topoisomerase IA(Evalue: 0) |
| [B] Desulfotomaculum reducens (strain MI-1) | DESRM01901 | A4J5Z9 | DNA topoisomerase I |
| [B] Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) | PELTS01236 | A5D2W4 | DNA topoisomerase |
| [B] Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) | CALS801146 | A4XIW7 | DNA topoisomerase I |
| [B] Syntrophomonas wolfei subsp. wolfei (strain Goettingen) | SYNWW00785 | Q0AYP5 | DNA topoisomerase |
| [B] Moorella thermoacetica (strain ATCC 39073) | MOOTA00985 | Q2RJP9 | DNA topoisomerase |
| [B] Enterococcus faecalis | ENTFA01533 | C2DCJ7 | DNA topoisomerase |
| [B] Lactobacillus acidophilus | LACAC00923 | C2HP74 | COG0550 Topoisomerase IA DNA topoisomerase I |
| [B] Lactobacillus brevis (strain ATCC 367 / JCM 1170) | LACBA00755 | Q03S81 | DNA topoisomerase I, TopA |
| [B] Lactobacillus casei (strain BL23) | LACCB01540 | B3WEA5 | DNA topoisomerase I |
| [B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) | LACDA01173 | Q1G9V0 | DNA topoisomerase I |
| [B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) | LACDB00983 | Q04A01 | DNA topoisomerase I, TopA |
| [B] Lactobacillus fermentum (strain IFO 3956 / LMG 18251) | LACF300885 | B2GC53 | DNA topoisomerase I |
| [B] Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) | LACGA00828 | Q043R7 | DNA topoisomerase I, TopA |
| [B] Lactobacillus helveticus (strain DPC 4571) | LACH400824 | A8YV47 | DNA topoisomerase I |
| [B] Lactobacillus johnsonii | LACJO00946 | Q74JJ9 | DNA topoisomerase I |
| [B] Lactobacillus reuteri (strain DSM 20016) | LACRD00753 | A5VJL9 | DNA topoisomerase I |
| [B] Lactobacillus reuteri (strain JCM 1112) | LACRJ00735 | B2G733 | DNA topoisomerase I |
| [B] Lactobacillus sakei subsp. sakei (strain 23K) | LACSS00976 | Q38WZ0 | DNA topoisomerase I |
| [B] Lactobacillus salivarius subsp. salivarius (strain UCC118) | LACS100701 | Q1WU05 | DNA topoisomerase I COG0550 [L] Topoisomerase IA |
| [B] Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) | PEDPA00910 | Q03FK1 | DNA topoisomerase I, TopA |
| [B] Oenococcus oeni (strain BAA-331 / PSU-1) | OENOB00916 | Q04F42 | DNA topoisomerase I, TopA |
| [B] Lactococcus lactis subsp. cremoris (strain MG1363) | LACLM01212 | A2RKQ1 | DNA topoisomerase I |
| [B] Lactococcus lactis subsp. cremoris (strain SK11) | LACLS01148 | Q02YZ2 | DNA topoisomerase I, TopA |
| [B] Lactococcus lactis subsp. lactis | LACLA01201 | TOP1_LACLA | DNA topoisomerase 1 |
| [B] Streptococcus agalactiae (serotype III) | STRA300942 | Q8E5I9 | similar to DNA topoisomerase I Unknown |
| [B] Streptococcus agalactiae (serotype V) | STRA500973 | Q8DZU2 | identified by match to PFAM protein family HMM PF01131 DNA topoisomerase I |
| [B] Streptococcus agalactiae serotype Ia | STRA100983 | Q3K182 | identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Streptococcus equi subsp. equi (strain 4047) | STRE401097 | C0M6D0 | DNA topoisomerase I |
| [B] Streptococcus equi subsp. zooepidemicus (strain H70) | STRS700980 | C0MFG2 | DNA topoisomerase I Ortholog of S. equi 4047 (FM204883) SEQ1219 |
| [B] Streptococcus equi subsp. zooepidemicus (strain MGCS10565) | STREM00933 | B4U2W8 | DNA topoisomerase I TopA |
| [B] Streptococcus mutans | STRMU00904 | Q8DUD3 | Best Blastp Hit: sp|P39814|TOP1_BACSU DNA TOPOISOMERASE I (OMEGA-PROTEIN) (RELAXING ENZYME) (UNTWISTING ENZYME) (SWIVELASE) >gi|7449002|pir||G69724 DNA topoisomerase I topA - Bacillus subtilis >gi|520753|gb|AAA22763.1| (L27797) DNA topoisomerase I [Bacillus subtilis] >gi|2462970|emb|CAA04422.1| (AJ000975) DNA Topoisomerase I [Bacillus subtilis] >gi|2633984|emb|CAB13485.1| (Z99112) DNA topoisomerase I [Bacillus subtilis] putative DNA topoisomerase I |
| [B] Streptococcus pneumoniae | STRPN01165 | Q97QF3 | identified by match to TIGR protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Streptococcus pneumoniae (strain ATCC BAA-255 / R6) | STRR601134 | Q8DPI9 | DNA topoisomerase I |
| [B] Streptococcus pneumoniae (strain CGSP14) | STRPS01025 | B2IPL8 | DNA topoisomerase I |
| [B] Streptococcus pneumoniae (strain Hungary19A-6) | STRPI01251 | B1IC54 | DNA topoisomerase I |
| [B] Streptococcus pneumoniae (strain JJA) | STRZJ01109 | C1CEL7 | DNA topoisomerase I |
| [B] Streptococcus pneumoniae (strain P1031) | STRZP01183 | C1CKZ7 | DNA topoisomerase I |
| [B] Streptococcus pneumoniae serotype 19F (strain G54) | STRP401132 | B5E4Z9 | DNA topoisomerase I |
| [B] Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) | STRP201053 | Q04K59 | DNA topoisomerase I equivalent gene in S.pneumoniae TIGR4 = SP1263; equivalent gene in S.pneumoniae R6 = spr1141; identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 |
| [B] Streptococcus pyogenes (serotype M18) | STRP800907 | Q8P107 | best blastp match gb|AAK34035.1| (AE006558) putative DNA topoisomerase I [Streptococcus pyogenes M1 GAS] putative DNA topoisomerase I |
| [B] Streptococcus pyogenes (serotype M3) | STRP300819 | Q8K7G5 | best blastp hit: gb|AAL97745.1| (AE010038) putative DNA topoisomerase I [Streptococcus pyogenes MGAS8232] putative DNA topoisomerase I |
| [B] Streptococcus pyogenes (serotype M6) | STRP600876 | Q5XC47 | DNA topoisomerase I |
| [B] Streptococcus pyogenes serotype M1 | STRP101425 | Q99ZM4 | DNA topoisomerase |
| [B] Streptococcus pyogenes serotype M12 (strain MGAS2096) | STRPB00946 | Q1JBP7 | DNA topoisomerase I |
| [B] Streptococcus pyogenes serotype M12 (strain MGAS9429) | STRPC00992 | Q1JLM9 | DNA topoisomerase I |
| [B] Streptococcus pyogenes serotype M2 (strain MGAS10270) | STRPD00976 | Q1JGT0 | DNA topoisomerase I |
| [B] Streptococcus pyogenes serotype M28 | STRPM00852 | Q48TI8 | DNA topoisomerase I |
| [B] Streptococcus pyogenes serotype M4 (strain MGAS10750) | STRPF01021 | Q1J6J9 | DNA topoisomerase I |
| [B] Streptococcus pyogenes serotype M49 (strain NZ131) | STRPZ00860 | B5XLK9 | Putative DNA topoisomerase I |
| [B] Streptococcus pyogenes serotype M5 (strain Manfredo) | STRPG00879 | A2REF8 | DNA topoisomerase I |
| [B] Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) | STRT200828 | Q5M4N3 | DNA topoisomerase I |
| [B] Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) | STRTD00744 | Q03KX4 | DNA topoisomerase I, TopA |
| [B] Streptococcus thermophilus (strain CNRZ 1066) | STRT100861 | Q5M018 | DNA topoisomerase I |
| [B] Acidiphilium cryptum (strain JF-5) | ACICJ00714 | A5FWG8 | DNA topoisomerase I |
| [B] Rickettsia akari (strain Hartford) | RICAH00449 | A8GN12 | DNA topoisomerase I |
| [B] Rickettsia canadensis (strain McKiel) | RICCK00745 | A8EZB7 | DNA topoisomerase I |
| [B] Chromobacterium violaceum | CHRVO04260 | Q7NQ71 | identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0550 DNA topoisomerase |
| [B] Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) | NEIG101655 | Q5F5Q4 | Best Blastp Hit: pir||A82009 DNA topoisomerase (EC 5.99.1.2) I NMA0156 [imported] - Neisseria meningitidis (group A strain Z2491) >gi|7378927|emb|CAB83470.1| (AL162752) DNA topoisomerase I [Neisseria meningitidis] COG0550 Topoisomerase IA; TopA putative DNA topoisomerase I |
| [B] Neisseria gonorrhoeae (strain NCCP11945) | NEIG202325 | B4RPY3 | DNA topoisomerase I |
| [B] Neisseria meningitidis serogroup A | NEIMA00143 | A1IP16 | DNA topoisomerase I |
| [B] Neisseria meningitidis serogroup B | NEIMB00107 | Q9K1K0 | DNA topoisomerase |
| [B] Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) | NEIMF00093 | A1KRF3 | DNA topoisomerase I |
| [B] Desulfatibacillum alkenivorans (strain AK-01) | DESAA01162 | B8F9E0 | DNA topoisomerase I |
| [B] Desulfovibrio desulfuricans (strain G20) | DESDG00106 | Q317I9 | DNA topoisomerase I |
| [B] Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) | DESVH03356 | Q725N5 | identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Desulfovibrio vulgaris subsp. vulgaris (strain DP4) | DESVV00011 | A1V9C8 | DNA topoisomerase I |
| [B] Lawsonia intracellularis (strain PHE/MN1-00) | LAWIP00653 | Q1MQL9 | Zn-finger domain associated with topoisomerase type I |
| [B] Pelobacter propionicus (strain DSM 2379) | PELPD00506 | A1ALD9 | DNA topoisomerase I KEGG: gme:Gmet_0891 DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein |
| [B] Anaeromyxobacter dehalogenans (strain 2CP-C) | ANADE02689 | Q2ILD8 | DNA topoisomerase |
| [B] Syntrophus aciditrophicus (strain SB) | SYNAS01350 | Q2LT40 | DNA topoisomerase I |
| [B] Campylobacter concisus (strain 13826) | CAMC101769 | A7ZFR7 | DNA topoisomerase I |
| [B] Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) | CAMLR00156 | B9KEN9 | DNA topoisomerase I |
| [B] Helicobacter hepaticus | HELHP01792 | Q7VF79 | DNA topoisomerase I |
| [B] Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) | NAUPA00105 | B9L7D9 | DNA topoisomerase I |
| [B] Nitratiruptor sp. (strain SB155-2) | NITSB01651 | A6Q5J8 | DNA topoisomerase I |
| [B] Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) | ACIF200014 | B7J3B6 | DNA topoisomerase I |
| [B] Acidithiobacillus ferrooxidans (strain ATCC 53993) | ACIF500016 | B5EJ79 | DNA topoisomerase I |
| [B] Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) | AERHH03021 | A0KMV3 | DNA topoisomerase I identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 |
| [B] Aeromonas salmonicida (strain A449) | AERS402799 | A4SQD3 | DNA topoisomerase I |
| [B] Alteromonas macleodii (strain DSM 17117 / Deep ecotype) | ALTMD02305 | B4S1Q4 | DNA topoisomerase I |
| [B] Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) | MARAV01085 | A1TZR9 | DNA topoisomerase I KEGG: hch:HCH_04752 DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase I, zinc ribbon domain protein, ; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein |
| [B] Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) | SACD201773 | Q21JT6 | DNA topoisomerase |
| [B] Colwellia psychrerythraea (strain 34H / ATCC BAA-681) | COLP301136 | Q486S5 | identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Idiomarina loihiensis | IDILO01000 | Q5QWH4 | Topoisomerase IA |
| [B] Pseudoalteromonas atlantica (strain T6c / BAA-1087) | PSEA602332 | Q15TB6 | DNA topoisomerase I |
| [B] Pseudoalteromonas haloplanktis (strain TAC 125) | PSEHT01307 | Q3IL29 | Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme DNA topoisomerase type I, omega protein |
| [B] Shewanella baltica (strain OS155 / ATCC BAA-1091) | SHEB502253 | A3D5H6 | DNA topoisomerase I |
| [B] Shewanella baltica (strain OS185) | SHEB802437 | A6WP87 | DNA topoisomerase I |
| [B] Shewanella baltica (strain OS195) | SHEB902550 | A9L515 | KEGG: spc:Sputcn32_2250 DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase I zinc ribbon domain protein ; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein DNA topoisomerase I |
| [B] Shewanella baltica (strain OS223) | SHEB201789 | B8E787 | DNA topoisomerase I |
| [B] Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) | SHEDO02286 | Q12LR8 | DNA topoisomerase |
| [B] Shewanella frigidimarina (strain NCIMB 400) | SHEFN02436 | Q080J2 | DNA topoisomerase I |
| [B] Shewanella loihica (strain BAA-1088 / PV-4) | SHELP02214 | A3QF42 | DNA topoisomerase I KEGG: shm:Shewmr7_1660 DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase I, zinc ribbon domain protein, ; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein |
| [B] Shewanella oneidensis | SHEON02538 | Q8EDN8 | DNA topoisomerase |
| [B] Shewanella pealeana (strain ANG-SQ1 / ATCC 700345) | SHEPA01507 | A8H2S3 | KEGG: slo:Shew_2224 DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase I zinc ribbon domain protein ; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein DNA topoisomerase I |
| [B] Shewanella piezotolerans (strain WP3 / JCM 13877) | SHEPW01657 | B8CN12 | DNA topoisomerase I |
| [B] Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) | SHEPC02212 | A4Y7N8 | DNA topoisomerase I |
| [B] Shewanella sediminis (strain HAW-EB3) | SHESH02831 | A8FX75 | KEGG: slo:Shew_2224 DNA topoisomerase I DNA topoisomerase |
| [B] Shewanella sp. (strain ANA-3) | SHESA01710 | A0KVZ3 | DNA topoisomerase I KEGG: son:SO2705 DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase I, zinc ribbon domain protein, bacterial-type; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein |
| [B] Shewanella sp. (strain MR-4) | SHESM01577 | Q0HJV5 | DNA topoisomerase I |
| [B] Shewanella sp. (strain MR-7) | SHESR01643 | Q0HW50 | DNA topoisomerase I |
| [B] Shewanella sp. (strain W3-18-1) | SHESW01719 | A1RIV0 | DNA topoisomerase I KEGG: shm:Shewmr7_1660 DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase I, zinc ribbon domain protein, ; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein |
| [B] Shewanella woodyi (strain ATCC 51908 / MS32) | SHEWM01781 | B1KNL0 | DNA topoisomerase I |
| [B] Buchnera aphidicola (subsp. Schizaphis graminum) | BUCAP00260 | TOP1_BUCAP | DNA topoisomerase I |
| [B] Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) | CITK801299 | A8AG75 | Putative uncharacterized protein |
| [B] Enterobacter sakazakii (strain ATCC BAA-894) | ENTS801513 | A7MMF9 | Putative uncharacterized protein |
| [B] Enterobacter sp. (strain 638) | ENT3802179 | A4WAZ1 | DNA topoisomerase I |
| [B] Erwinia tasmaniensis (strain DSM 17950 / ET1/99) | ERWT901612 | B2VKR3 | DNA topoisomerase 1 |
| [B] Escherichia coli (strain 55989 / EAEC) | ECO5501377 | B7L4A7 | DNA topoisomerase I, omega subunit |
| [B] Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) | ECOLC02281 | B1ITI2 | DNA topoisomerase |
| [B] Escherichia coli (strain DH10B) | ECODH01195 | B1XBM3 | DNA topoisomerase I, omega subunit |
| [B] Escherichia coli (strain K12) | ECOLI01230 | TOP1_ECOLI | DNA topoisomerase 1 |
| [B] Escherichia coli (strain SE11) | ECOSE01312 | B6I9Y7 | DNA topoisomerase I |
| [B] Escherichia coli (strain SMS-3-5 / SECEC) | ECOSM01778 | B1LH17 | DNA topoisomerase I |
| [B] Escherichia coli (strain UTI89 / UPEC) | ECOUT01505 | Q1RC93 | DNA topoisomerase I |
| [B] Escherichia coli O127:H6 (strain E2348/69 / EPEC) | ECO2701429 | B7UR80 | DNA topoisomerase I, omega subunit |
| [B] Escherichia coli O139:H28 (strain E24377A / ETEC) | ECO2401382 | A7ZL92 | DNA topoisomerase I |
| [B] Escherichia coli O157:H7 | ECO5702072 | B2NSD7 | Residues 1 to 865 of 865 are 99.88 pct identical to residues 1 to 865 of 865 from Escherichia coli K-12 Strain MG1655: B1274 DNA topoisomerase type I, omega protein |
| [B] Escherichia coli O157:H7 (strain EC4115 / EHEC) | ECO5E01591 | B5YZQ3 | DNA topoisomerase I |
| [B] Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) | ECOLU01537 | B7N487 | DNA topoisomerase I, omega subunit |
| [B] Escherichia coli O1:K1 / APEC | ECOK101233 | A1AAP3 | DNA topoisomerase I |
| [B] Escherichia coli O45:K1 (strain S88 / ExPEC) | ECO4501339 | B7MLU8 | DNA topoisomerase I, omega subunit |
| [B] Escherichia coli O6 | ECOL601658 | Q8FHU9 | DNA topoisomerase I |
| [B] Escherichia coli O6:K15:H31 (strain 536) | ECOL501301 | Q0TI93 | DNA topoisomerase I |
| [B] Escherichia coli O7:K1 (strain IAI39 / ExPEC) | ECO7I01533 | B7NVP6 | DNA topoisomerase I, omega subunit |
| [B] Escherichia coli O81 (strain ED1a) | ECO8101413 | B7MUB3 | DNA topoisomerase I, omega subunit |
| [B] Escherichia coli O9:H4 (strain HS) | ECOHS01283 | A7ZZL0 | DNA topoisomerase I |
| [B] Klebsiella pneumoniae (strain 342) | KLEP303084 | B5XS18 | DNA topoisomerase I |
| [B] Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) | KLEP701235 | A6T7Y2 | DNA topoisomerase |
| [B] Erwinia carotovora (subsp. atroseptica) | ERWCT02264 | Q6D4V4 | Similar to Escherichia coli DNA topoisomerase I TopA or SupX or b1274 SWALL:TOP1_ECOLI (SWALL:P06612) (865 aa) fasta scores: E(): 0, 85.68% id in 866 aa, and to Yersinia pestis DNA topoisomerase I TopA or ypo2218 or y2060 SWALL:Q8ZEF4 (EMBL:AJ414151) (871 aa) fasta scores: E(): 0, 87.83% id in 871 aa DNA topoisomerase I |
| [B] Photorhabdus luminescens (subsp. laumondii) | PHOLL02367 | Q7N4B4 | DNA topoisomerase I (omega protein) (relaxing enzyme) (untwisting enzyme) (swivelase) |
| [B] Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) | SALAR01187 | A9MQ04 | Putative uncharacterized protein |
| [B] Salmonella agona (strain SL483) | SALA401326 | B5F4N5 | DNA topoisomerase I |
| [B] Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 | SALCH01691 | Q57NU4 | IPR000380: DNA topoisomerase I DNA topoisomerase type I, omega protein |
| [B] Salmonella dublin (strain CT_02021853) | SALDC01471 | B5FU77 | DNA topoisomerase I |
| [B] Salmonella enteritidis PT4 (strain P125109) | SALEP01304 | B5R479 | DNA topoisomerase I, omega protein I |
| [B] Salmonella gallinarum (strain 287/91 / NCTC 13346) | SALG201358 | B5R6N6 | DNA topoisomerase I, omega protein I |
| [B] Salmonella heidelberg (strain SL476) | SALHS01782 | B4TJJ7 | DNA topoisomerase I |
| [B] Salmonella newport (strain SL254) | SALNS01737 | B4T6W0 | DNA topoisomerase I |
| [B] Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) | SALPB01467 | A9MWS7 | Putative uncharacterized protein |
| [B] Salmonella paratyphi A (strain AKU_12601) | SALPK01121 | B5BID1 | DNA topoisomerase I, omega protein I |
| [B] Salmonella paratyphi-a | SALPA01076 | Q5PD10 | similar to Salmonella typhi CT18 DNA topoisomerase I, omega protein I DNA topoisomerase I, omega protein I |
| [B] Salmonella schwarzengrund (strain CVM19633) | SALSV01736 | B4TX27 | DNA topoisomerase I |
| [B] Salmonella typhi | SALTI01206 | TOP1_SALTI | DNA topoisomerase 1 |
| [B] Salmonella typhimurium | SALTY01649 | TOP1_SALTY | similar to Escherichia coli DNA topoisomerase type I omega protein (AAC74356.1) DNA topoisomerase type I |
| [B] Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) | SHIB301144 | B2U0G3 | DNA topoisomerase I |
| [B] Shigella boydii serotype 4 (strain Sb227) | SHIBS01434 | Q31ZW7 | Code: L; COG: COG0550 DNA topoisomerase type I, omega protein |
| [B] Shigella dysenteriae serotype 1 (strain Sd197) | SHIDS01034 | Q32GR4 | Code: L; COG: COG0550 DNA topoisomerase type I, omega protein |
| [B] Shigella flexneri | SHIFL01161 | NP_707181.1 | Residues 15 to 879 of 879 are 99 pct identical to residues 1 to 865 of a 865 aa protein from Escherichia coli K12 ref: NP_415790.1 DNA topoisomerase type I, omega protein |
| [B] Shigella flexneri serotype 5b (strain 8401) | SHIF801109 | Q0T5C5 | DNA topoisomerase type I, omega protein Code: L; COG: COG0550 |
| [B] Shigella sonnei (strain Ss046) | SHISS01529 | Q3Z121 | omega protein; Code: L; COG: COG0550 DNA topoisomerase type I |
| [B] Sodalis glossinidius (strain morsitans) | SODGM01382 | Q2NT42 | DNA topoisomerase I |
| [B] Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) | YERE802073 | A1JPS1 | DNA topoisomerase I |
| [B] Yersinia pestis | YERPE02040 | A6BQF7 | DNA topoisomerase |
| [B] Yersinia pestis (biovar Antiqua strain Antiqua) | YERPA01486 | Q1C7M9 | DNA topoisomerase I |
| [B] Yersinia pestis (biovar Antiqua strain Nepal516) | YERPN01610 | Q1CJ15 | DNA topoisomerase I |
| [B] Yersinia pestis (strain Pestoides F) | YERPP00860 | A4TJ55 | DNA topoisomerase I |
| [B] Yersinia pestis bv. Antiqua (strain Angola) | YERPG01983 | A9R984 | DNA topoisomerase I |
| [B] Yersinia pseudotuberculosis | YERPS02119 | Q66AJ0 | DNA topoisomerase |
| [B] Yersinia pseudotuberculosis (serotype O:1b / strain IP 31758) | YERP301881 | A7FI20 | DNA topoisomerase I |
| [B] Yersinia pseudotuberculosis serotype IB (strain PB1/+) | YERPB02154 | B2K3X5 | DNA topoisomerase I |
| [B] Yersinia pseudotuberculosis serotype O:3 (strain YPIII) | YERPY01995 | B1JKQ9 | DNA topoisomerase |
| [B] Legionella pneumophila (strain Corby) | LEGPC00528 | A5IAX8 | DNA topoisomerase |
| [B] Legionella pneumophila (strain Lens) | LEGPL02515 | Q5WTK2 | DNA topoisomerase I |
| [B] Legionella pneumophila (strain Paris) | LEGPA02637 | Q5X1U1 | DNA topoisomerase I |
| [B] Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152) | LEGPH02525 | Q5ZSC0 | conserved gene DNA topoisomerase I |
| [B] Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) | ALCBS01010 | Q0VQT8 | Type I DNA topoisomerase |
| [B] Hahella chejuensis (strain KCTC 2396) | HAHCH04479 | Q2SD25 | DNA topoisomerase I TIGRFAMsMatches:TIGR01051 |
| [B] Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) | CHRSD01548 | Q1QX95 | DNA topoisomerase |
| [B] Marinomonas sp. (strain MWYL1) | MARMS02078 | A6VX57 | DNA topoisomerase I |
| [B] Actinobacillus pleuropneumoniae serotype 3 (strain JL03) | ACTPJ00654 | B0BNX8 | DNA topoisomerase I |
| [B] Actinobacillus pleuropneumoniae serotype 5b (strain L20) | ACTP200687 | A3N060 | DNA topoisomerase 1 |
| [B] Actinobacillus pleuropneumoniae serotype 7 (strain AP76) | ACTP700720 | B3GXD1 | DNA topoisomerase 1 |
| [B] Actinobacillus succinogenes (strain ATCC 55618 / 130Z) | ACTSZ01374 | A6VP61 | DNA topoisomerase I |
| [B] Haemophilus ducreyi | HAEDU01173 | Q7VLN7 | DNA topoisomerase I |
| [B] Haemophilus influenzae | HAEIN01333 | TOP1_HAEIN | DNA topoisomerase 1 |
| [B] Haemophilus influenzae (strain 86-028NP) | HAEI801566 | Q4QK75 | Omega-protein; relaxing enzyme; untwisting enzyme; swivelase; Similar to: HI1365, TOP1_HAEIN DNA topoisomerase I |
| [B] Haemophilus influenzae (strain PittEE) | HAEIE00766 | A5UBX2 | DNA topoisomerase I |
| [B] Haemophilus influenzae (strain PittGG) | HAEIG00076 | A5UEJ9 | DNA topoisomerase I |
| [B] Haemophilus parasuis serovar 5 (strain SH0165) | HAEPS00192 | B8F3J9 | DNA topoisomerase I |
| [B] Haemophilus somnus (strain 129PT) | HAES100915 | Q0I3F2 | DNA topoisomerase I |
| [B] Haemophilus somnus (strain 2336) | HAES201352 | B0UUB3 | DNA topoisomerase I |
| [B] Mannheimia succiniciproducens (strain MBEL55E) | MANSM01093 | Q65TK7 | Topoisomerase IA TopA protein |
| [B] Pasteurella multocida | PASMU00615 | TOP1_PASMU | DNA topoisomerase 1 |
| [B] Acinetobacter baumannii (strain AB0057) | ACIB500498 | B7I4S0 | DNA topoisomerase I |
| [B] Acinetobacter baumannii (strain AB307-0294) | ACIB303034 | B7H0R4 | DNA topoisomerase I |
| [B] Acinetobacter baumannii (strain ACICU) | ACIBC00446 | B2I382 | Topoisomerase IA |
| [B] Acinetobacter baumannii (strain AYE) | ACIBY03086 | B0V4P1 | DNA topoisomerase type I, omega protein |
| [B] Acinetobacter baumannii (strain SDF) | ACIBS02686 | B0VL89 | DNA topoisomerase type I, omega protein |
| [B] Acinetobacter sp. (strain ADP1) | ACIAD00434 | Q6FET8 | Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme DNA topoisomerase type I, omega protein |
| [B] Psychrobacter arcticus (strain DSM 17307 / 273-4) | PSYA201639 | Q4FR50 | DNA topoisomerase I |
| [B] Psychrobacter cryohalolentis (strain K5) | PSYCK01882 | Q1Q9H5 | DNA topoisomerase |
| [B] Psychrobacter sp. (strain PRwf-1) | PSYWF00384 | A5WCF7 | DNA topoisomerase I |
| [B] Cellvibrio japonicus (strain Ueda107) | CELJU01927 | B3PHK9 | Putative DNA topoisomerase I |
| [B] Pseudomonas aeruginosa | PSEAE03005 | TOP1_PSEAE | DNA topoisomerase 1 |
| [B] Pseudomonas aeruginosa (strain LESB58) | PSEA802034 | B7UYR9 | DNA topoisomerase I |
| [B] Pseudomonas aeruginosa (strain PA7) | PSEA702093 | A6V385 | DNA topoisomerase I |
| [B] Pseudomonas aeruginosa (strain UCBPP-PA14) | PSEAB02002 | Q02PH5 | DNA topoisomerase I |
| [B] Pseudomonas entomophila (strain L48) | PSEE403440 | Q1I7D7 | DNA topoisomerase type I, omega protein Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3029379; Product type e : enzyme |
| [B] Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) | PSEF501909 | Q4KFC2 | identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Pseudomonas fluorescens (strain PfO-1) | PSEPF03862 | Q3K9E1 | DNA topoisomerase I |
| [B] Pseudomonas mendocina (strain ymp) | PSEMY01556 | A4XSN1 | DNA topoisomerase I |
| [B] Pseudomonas putida (strain F1 / ATCC 700007) | PSEP103544 | A5W6G7 | DNA topoisomerase I |
| [B] Pseudomonas putida (strain GB-1) | PSEPG01661 | B0KH77 | DNA topoisomerase I unknown EC_number=5.99.1.2 KEGG: pen:PSEEN3725 DNA topoisomerase type I, omega protein TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase I zinc ribbon domain protein ; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein |
| [B] Pseudomonas putida (strain KT2440) | PSEPK02106 | Q88KZ9 | identified by match to PFAM protein family HMM PF01131 DNA topoisomerase I |
| [B] Pseudomonas putida (strain W619) | PSEPW01653 | B1J5A8 | DNA topoisomerase I |
| [B] Pseudomonas stutzeri (strain A1501) | PSEU501674 | A4VKA6 | DNA topoisomerase I |
| [B] Pseudomonas syringae (pv. tomato) | PSESM03334 | Q87ZB5 | similar to SP:P06612; identified by sequence similarity; putative DNA topoisomerase I |
| [B] Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) | PSE1402986 | Q48GW6 | identified by similarity to SP:P06612; match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 DNA topoisomerase I |
| [B] Pseudomonas syringae pv. syringae (strain B728a) | PSEU203270 | Q4ZRA3 | DNA topoisomerase I |
| [B] Francisella tularensis (subsp. tularensis) | FRATT00873 | A7JCE6 | Similar to AAO91489 DNA topoisomerase I (765 aa) FASTA: opt: 2920 Z-score: 3070.8 E(): 3.4e-163 Smith-Waterman score: 2920; 54.712 identity in 764 aa overlap. DNA topoisomerase I |
| [B] Francisella tularensis subsp. holarctica (strain FTA) | FRATF00329 | A7NAC2 | DNA topoisomerase |
| [B] Francisella tularensis subsp. holarctica (strain LVS) | FRATH00383 | Q2A504 | DNA topoisomerase I |
| [B] Francisella tularensis subsp. holarctica (strain OSU18) | FRATO00319 | Q0BNC3 | DNA topoisomerase |
| [B] Francisella tularensis subsp. mediasiatica (strain FSC147) | FRATM00392 | B2SF80 | DNA topoisomerase I |
| [B] Francisella tularensis subsp. novicida (strain U112) | FRATN00424 | A0Q520 | DNA topoisomerase I |
| [B] Francisella tularensis subsp. tularensis (strain WY96-3418) | FRATW00992 | A4IYQ0 | DNA topoisomerase I |
| [B] Mycobacteriophage FRAT1 | FRAT100871 | Q14HU1 | DNA topoisomerase I Similar to AAO91489 DNA topoisomerase I (765 aa) FASTA: opt: 2920 Z-score: 3070.8 E(): 3.4e-163 Smith-Waterman score: 2920; 54.712 identity in 764 aa overlap. |
| [B] Aliivibrio salmonicida (strain LFI1238) | ALISL01042 | B6EJI6 | DNA topoisomerase I |
| [B] Vibrio fischeri (strain MJ11) | VIBFM01072 | B5FDD0 | DNA topoisomerase I |
| [B] Photobacterium profundum | PHOPR02311 | Q6LPB7 | putative DNA topoisomerase I |
| [B] Vibrio cholerae | VIBCH01698 | TOP1_VIBCH | similar to GB:X04475 SP:P06612 PID:145664 PID:415338 GB:U00096; identified by sequence similarity; putative DNA topoisomerase I |
| [B] Vibrio cholerae (strain ATCC 39541 / O395) | VIBC301227 | A5F7G3 | DNA topoisomerase I |
| [B] Vibrio cholerae serotype O1 (strain M66-2) | VIBCM01632 | C3LN52 | |
| [B] Vibrio fischeri (strain ATCC 700601 / ES114) | VIBF101048 | Q5E600 | DNA topoisomerase I |
| [B] Vibrio harveyi (strain ATCC BAA-1116 / BB120) | VIBHB01367 | A7N1K5 | Putative uncharacterized protein |
| [B] Vibrio parahaemolyticus | VIBPA01021 | A6B4G4 | similar to GB:AAF94880.1 (AE004251) percent identity 85 in 876 aa DNA topoisomerase I |
| [B] Vibrio splendidus (strain LGP32) | VIBSL00985 | B7VM40 | DNA topoisomerase I |
| [B] Vibrio vulnificus | VIBVU01924 | Q8DAR2 | COG0551 DNA topoisomerase I |
| [B] Vibrio vulnificus (strain YJ016) | VIBVY02286 | Q7MJ48 | DNA topoisomerase |
| [B] Magnetococcus sp. (strain MC-1) | MAGSM03489 | A0LDV2 | DNA topoisomerase I KEGG: lpn:lpg2599 DNA topoisomerase I TIGRFAM: DNA topoisomerase I PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, Zn finger domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein |
| [B] Acholeplasma laidlawii (strain PG-8A) | ACHLI00317 | A9NF31 | DNA topoisomerase IA |
| [B] Phytoplasma mali (strain AT) | PHYMT00042 | B3R098 | DNA topoisomerase I |
| [B] Mesoplasma florum | MESFL00654 | Q6F0G3 | DNA topoisomerase I |
| [B] Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) | MYCCT00740 | Q2SR72 | DNA topoisomerase I identified by similarity to SP:P39814; match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751 |
| [B] Mycoplasma gallisepticum | MYCGA00633 | TOP1_MYCGA | DNA topoisomerase 1 |
| [B] Mycoplasma mycoides subsp. mycoides SC | MYCMS00869 | Q6MS50 | DNA topoisomerase I |
| [B] Petrotoga mobilis (strain DSM 10674 / SJ95) | PETMO01580 | A9BI47 | DNA topoisomerase I |