List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 16351

Aspartate carbamoyltransferase
This group has 10 members: 4 [A]rchaea 6 [B]acteria
Fingerprint: VASSYRI

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Haloarcula marismortuiHALMA01081  UniProtKB/Swiss-Prot PYRB_HALMA  aspartate carbamoyltransferase
[A] Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)METMJ01666  UniProtKB/Swiss-Prot PYRB_METMJ  Aspartate carbamoyltransferase
[A] Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)METPE02413  UniProtKB/Swiss-Prot PYRB_METPE  Aspartate carbamoyltransferase
[A] Picrophilus torridusPICTO00965  UniProtKB/Swiss-Prot PYRB_PICTO  Aspartate carbamoyltransferase
[B] Acidobacteria bacterium (strain Ellin345)ACIBL01816  UniProtKB/TrEMBL Q1IQM8  aspartate carbamoyltransferase
[B] Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)CLOPH02708  UniProtKB/Swiss-Prot PYRB_CLOPH  Aspartate carbamoyltransferase
[B] Shewanella halifaxensis (strain HAW-EB4)SHEHH03022  UniProtKB/Swiss-Prot PYRB3_SHEHH  Aspartate carbamoyltransferase
[B] Dichelobacter nodosus (strain VCS1703A)DICNV00457  UniProtKB/Swiss-Prot PYRB_DICNV  Aspartate carbamoyltransferase
[B] Francisella tularensis subsp. mediasiatica (strain FSC147)FRATM00006  UniProtKB/TrEMBL B2SEG6  Aspartate carbamoyltransferase
[B] Vibrio splendidus (strain LGP32)VIBSL02566  UniProtKB/TrEMBL B7VKT7  Aspartate carbamoyltransferase, catalytic chain