List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 243003

Ribonuclease P protein component 2
This group has 9 members: 9 [A]rchaea
Fingerprint: RINGKRA

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Haloarcula marismortuiHALMA01037  UniProtKB/Swiss-Prot RNP2_HALMA  RNaseP subunit 14
[A] Halobacterium salinariumHALSA00982  UniProtKB/Swiss-Prot RNP2_HALSA  Ribonuclease P protein component 2
[A] Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)HALS301023  UniProtKB/Swiss-Prot RNP2_HALS3  Putative uncharacterized protein
[A] Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)HALLT00949  UniProtKB/Swiss-Prot RNP2_HALLT  Ribonuclease P-related
[A] Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)NATPD01819  UniProtKB/Swiss-Prot RNP2_NATPD  ribonuclease P protein component 2
[A] Methanococcoides burtonii (strain DSM 6242)METBU00178  UniProtKB/TrEMBL Q12ZC1  Ribonuclease P-related protein
[A] Methanosarcina barkeri (strain Fusaro / DSM 804)METBF02402  UniProtKB/Swiss-Prot RNP2_METBF  putative ribonuclease P subunit P14
[A] Methanosarcina mazeiMETMA02561  UniProtKB/Swiss-Prot RNP2_METMA  Ribonuclease P protein component 2
[A] Uncultured methanogenic archaeon RC-IUNCMA00988  UniProtKB/TrEMBL Q0W2Z2  putative RNase P, component 2