List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 63520

Methylmalonate-semialdehyde dehydrogenase
This group has 5 members: 5 [B]acteria
Fingerprint: MVRAESL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Mycobacterium avium (strain 104)MYCA102355  UniProtKB/TrEMBL A0QFM5  methylmalonate-semialdehyde dehydrogenase identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722
[B] Bacillus pumilus (strain SAFR-032)BACP201718  UniProtKB/Swiss-Prot IOLA_BACP2  Methylmalonate-semialdehyde dehydrogenase
[B] Caulobacter crescentusCAUCR01282  UniProtKB/TrEMBL Q9A8Q1  Methylmalonate-semialdehyde dehydrogenase, putative
[B] Phenylobacterium zucineum (strain HLK1)PHEZH01986  UniProtKB/TrEMBL B4RDL6  Methylmalonate-semialdehyde dehydrogenase
[B] Bdellovibrio bacteriovorusBDEBA01391  UniProtKB/TrEMBL Q6MMT9  hypothetical protein Methylmalonate-semialdehyde dehydrogenase