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Keyword Protein Sequence Group Entry

OMA Group 195140

4-hydroxy-3-methylbut-2-enyl diphosphate reductase
This group has 60 members: 60 [B]acteria
Fingerprint: REENIEF

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Mycobacterium marinum (strain ATCC BAA-535 / M)MYCMM00270  UniProtKB/TrEMBL B2HKN9  LytB-related protein LytB2
[B] Mycobacterium bovisMYCBO03403  UniProtKB/Swiss-Prot ISPH2_MYCBO  Mb3414c, lytB1, len: 329 aa. Equivalent to Rv3382c, len: 329 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 329 aa overlap). Probable lytB1, lytB-related protein, highly similar to many e.g. Q9HVM7|LYTB_PSEAE|PA4557 from Pseudomonas aeruginosa (314 aa), FASTA scores: opt: 1048, E(): 2e-55, (53.2% identity in 314 aa overlap); Q9JR39|LYTB|NMA0624|NMB1831 from Neisseria meningitidis (serogroup A and B) (322 aa), FASTA scores: opt: 1041, E(): 5.4e-55, (52.25% identity in 312 aa overlap); P22565|LYTB_ECOLI|B0029 from Escherichia coli strain K12 (316 aa), FASTA scores: opt: 1013, E(): 2.5e-53, (51.45% identity in 311 aa overlap) (for more information about lytB protein, see citation below); Q9X781|LYTB_MYCLE|LYTB2|ML1938|MLCB1222.06c from Mycobacterium leprae (332 aa), FASTA scores: opt: 979, E(): 2.8e-51, (51.3% identity in 312 aa overlap); etc. Also similar to Q9PAS9|XF2416 DRUG TOLERANCE PROTEIN from Xylella fastidiosa (316 aa), FASTA scores: opt: 1043, E(): 4.1e-55, (53.65% identity in 315 aa overlap). And similar to O53458|Rv1110|LYTB2|MTV017.63 from Mycobacterium tuberculosis (335 aa), FASTA scores: opt: 975, E(): 4.9e-51, (51.3% identity in 312 aa overlap). BELONGS TO THE LYTB FAMILY. PROBABLE LYTB-RELATED PROTEIN LYTB1
[B] Mycobacterium bovis (strain BCG / Paris 1173P2)MYCBP03392  UniProtKB/TrEMBL A1KP72  Probable lytB-related protein lytB1
[B] Mycobacterium tuberculosisMYCTU04492  UniProtKB/Swiss-Prot ISPH2_MYCTU  4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
[B] Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)MYCTA03445  UniProtKB/TrEMBL A5U856  Putative lytB-related protein LytB1
[B] Mycobacterium tuberculosis (strain F11)MYCTF03317  UniProtKB/TrEMBL A5WSV2  lytB-related protein lytB1 Mapped to H37Rv Rv3382c
[B] Acaryochloris marina (strain MBIC 11017)ACAM104716  UniProtKB/Swiss-Prot ISPH_ACAM1  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Synechococcus sp. (strain CC9311)SYNS300288  UniProtKB/Swiss-Prot ISPH_SYNS3  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Synechococcus sp. (strain JA-3-3Ab)SYNJA01076  UniProtKB/TrEMBL Q2JVA7  4-hydroxy-3-methylbut-2-enyl diphosphate reductase identified by match to protein family HMM PF02401; match to protein family HMM TIGR00216
[B] Synechococcus sp. (strain WH8102)SYNPX00252  UniProtKB/Swiss-Prot ISPH_SYNPX  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Synechocystis sp. (strain PCC 6803)SYNY302166  UniProtKB/Swiss-Prot ISPH_SYNY3  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Thermosynechococcus elongatus (strain BP-1)THEEB01017  UniProtKB/Swiss-Prot ISPH_THEEB  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Trichodesmium erythraeum (strain IMS101)TRIEI03831  UniProtKB/Swiss-Prot ISPH_TRIEI  Hydroxymethylbutenyl pyrophosphate reductase
[B] Prochlorococcus marinus (strain AS9601)PROMS00286  UniProtKB/Swiss-Prot ISPH_PROMS  LytB COG761 Penicillin tolerance protein [Lipid metabolism / Cell envelope biogenesis, outer membrane]
[B] Prochlorococcus marinus (strain MIT 9301)PROM000288  UniProtKB/Swiss-Prot ISPH_PROM0  LytB-like protein COG761 Penicillin tolerance protein [Lipid metabolism / Cell envelope biogenesis, outer membrane]
[B] Prochlorococcus marinus (strain MIT 9312)PROM900274  UniProtKB/Swiss-Prot ISPH_PROM9  Hydroxymethylbutenyl pyrophosphate reductase
[B] Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4)PROMP00271  UniProtKB/Swiss-Prot ISPH_PROMP  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Bradyrhizobium japonicumBRAJA02959  UniProtKB/Swiss-Prot ISPH2_BRAJA  4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
[B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB02766  UniProtKB/TrEMBL A5EG02  4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
[B] Bradyrhizobium sp. (strain ORS278)BRASO02468  UniProtKB/TrEMBL A4YRC4  4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
[B] Nitrobacter hamburgensis (strain X14 / DSM 10229)NITHX02519  UniProtKB/TrEMBL Q1QJY9  hydroxymethylbutenyl pyrophosphate reductase
[B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)NITWN02135  UniProtKB/TrEMBL Q3SQC1  LytB protein
[B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)OLICO02625  UniProtKB/TrEMBL B6JG66  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Rhodopseudomonas palustrisRHOPA03719  UniProtKB/Swiss-Prot ISPH1_RHOPA  observed by proteomics Citation: Proteomics from VerBerkmoes et al. (2003) unpublished penicillin tolerance protein
[B] Rhodopseudomonas palustris (strain BisA53)RHOP501790  UniProtKB/TrEMBL Q07QM0  hydroxymethylbutenyl pyrophosphate reductase KEGG: rpc:RPC_1726 hydroxymethylbutenyl pyrophosphate reductase TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase PFAM: LytB protein
[B] Rhodopseudomonas palustris (strain BisB18)RHOPB01698  UniProtKB/TrEMBL Q218A1  hydroxymethylbutenyl pyrophosphate reductase
[B] Rhodopseudomonas palustris (strain BisB5)RHOPS03546  UniProtKB/TrEMBL Q133E6  hydroxymethylbutenyl pyrophosphate reductase
[B] Rhodopseudomonas palustris (strain HaA2)RHOP201724  UniProtKB/TrEMBL Q2IZC3  hydroxymethylbutenyl pyrophosphate reductase
[B] Rhodopseudomonas palustris (strain TIE-1)RHOPT04185  UniProtKB/TrEMBL B3QHB7  Hydroxymethylbutenyl pyrophosphate reductase
[B] Methylobacterium nodulans (strain ORS2060 / LMG 21967)METNO06693  UniProtKB/TrEMBL B8IKB2  Hydroxymethylbutenyl pyrophosphate reductase
[B] Anaplasma phagocytophilum (strain HZ)ANAPZ00340  UniProtKB/TrEMBL Q2GKW5  4-hydroxy-3-methylbut-2-enyl diphosphate reductase identified by similarity to SP:P22565; match to protein family HMM PF02401; match to protein family HMM TIGR00216
[B] Zymomonas mobilisZYMMO00869  UniProtKB/Swiss-Prot ISPH_ZYMMO  COG0761 penicillin tolerance protein
[B] Burkholderia ambifaria (strain MC40-6)BURA405358  UniProtKB/TrEMBL B1Z2A5  Hydroxymethylbutenyl pyrophosphate reductase
[B] Burkholderia cenocepacia (strain AU 1054)BURCA05239  UniProtKB/TrEMBL Q1BJM3  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Burkholderia cenocepacia (strain HI2424)BURCH05510  UniProtKB/TrEMBL A0B3Q9  hydroxymethylbutenyl pyrophosphate reductase KEGG: bcn:Bcen_5308 hydroxymethylbutenyl pyrophosphate reductase TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase PFAM: LytB protein
[B] Burkholderia cenocepacia (strain MC0-3)BURCC04654  UniProtKB/TrEMBL B1K3V3  Hydroxymethylbutenyl pyrophosphate reductase
[B] Burkholderia cepacia (strain ATCC 53795 / AMMD)BURCM04854  UniProtKB/TrEMBL Q0B5Z8  hydroxymethylbutenyl pyrophosphate reductase KEGG: bur:Bcep18194_B0106 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase PFAM: LytB protein
[B] Burkholderia cepacia (strain J2315 / LMG 16656)BURCJ06147  UniProtKB/TrEMBL B4ELD6  4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2
[B] Burkholderia sp. (strain 383)BURS303432  UniProtKB/TrEMBL Q39BD8  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Burkholderia vietnamiensis (strain G4 / LMG 22486)BURVG03601  UniProtKB/TrEMBL A4JK98  Hydroxymethylbutenyl pyrophosphate reductase
[B] Burkholderia malleiBURMA04647  UniProtKB/Swiss-Prot ISPH1_BURMA  4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1
[B] Burkholderia mallei (strain NCTC 10229)BURM904391  UniProtKB/TrEMBL A2RZF0  Hydroxymethylbutenyl pyrophosphate reductase
[B] Burkholderia mallei (strain NCTC 10247)BURM705449  UniProtKB/TrEMBL A3MGM7  Hydroxymethylbutenyl pyrophosphate reductase
[B] Burkholderia mallei (strain SAVP1)BURMS04218  UniProtKB/TrEMBL A1UX76  Hydroxymethylbutenyl pyrophosphate reductase
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP804050  UniProtKB/TrEMBL B2JPR0  Hydroxymethylbutenyl pyrophosphate reductase
[B] Burkholderia phytofirmans (strain DSM 17436 / PsJN)BURPP06828  UniProtKB/TrEMBL B2T808  Hydroxymethylbutenyl pyrophosphate reductase
[B] Burkholderia pseudomalleiBURPS05632  UniProtKB/Swiss-Prot ISPH2_BURPS  Similar to Escherichia coli IspH protein SWALL:ISPH_ECOLI (SWALL:P22565) (316 aa) fasta scores: E(): 6.2e-59, 53.79% id in 316 aa. Almost identical to the previously sequenced as Burkholderia pseudomallei IspH protein SWALL:ISPH_BURPS (SWALL:Q9ZFL0) (313 aa) fasta scores: E(): 8.1e-113, 99.68% id in 313 aa IspH protein
[B] Burkholderia pseudomallei (strain 1106a)BURP006897  UniProtKB/TrEMBL A3P9E8  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Burkholderia pseudomallei (strain 1710b)BURP104986  UniProtKB/TrEMBL Q3JJ10  4-hydroxy-3-methylbut-2-enyl diphosphate reductase identified by match to protein family HMM PF02401; match to protein family HMM TIGR00216
[B] Burkholderia pseudomallei (strain 668)BURP606974  UniProtKB/TrEMBL A3NNX4  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA05396  UniProtKB/TrEMBL Q2T318  4-hydroxy-3-methylbut-2-enyl diphosphate reductase identified by match to protein family HMM PF02401; match to protein family HMM TIGR00216
[B] Burkholderia xenovorans (strain LB400)BURXL07261  UniProtKB/TrEMBL Q13J33  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Cupriavidus taiwanensis (strain R1 / LMG 19424)CUPTR05033  UniProtKB/TrEMBL B3RCA6  4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[B] Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)RALEH05790  UniProtKB/TrEMBL Q0JZ73  drug tolerance protein
[B] Ralstonia eutropha (strain JMP134)RALEJ04854  UniProtKB/TrEMBL Q46RI8  LytB protein
[B] Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)RALME04064  UniProtKB/TrEMBL Q1LFP0  hydroxymethylbutenyl pyrophosphate reductase
[B] Treponema pallidumTREPA00544  UniProtKB/Swiss-Prot ISPH_TREPA  similar to GP:2313506 percent identity: 32.12; identified by sequence similarity; putative penicillin tolerance protein (lytB)
[B] Treponema pallidum subsp. pallidum (strain SS14)TREPS00539  UniProtKB/Swiss-Prot ISPH_TREPS  Penicillin tolerance protein
[B] Akkermansia muciniphila (strain ATCC BAA-835)AKKM801618  UniProtKB/TrEMBL B2UM22  Hydroxymethylbutenyl pyrophosphate reductase
[B] Methylokorus infernorum (strain V4)METI402111  UniProtKB/TrEMBL B3DZ81  4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH