List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 131438
Tetratricopeptide TPR_2 repeat protein
This group has 3 members: 3 [B]acteria
Fingerprint: REEARTH
| [B] Azoarcus sp. (strain BH72) | AZOSB02693 | A1K914 | conserved hypothetical protein Conserved hypothetical protein. Homology to magn028431 of M. magnetotacticum of 33% (ZP 00053827). Domain structur: 76 aa - 144 aa TPR; 201 aa - 316 aa TPR; 408 aa - 761 aa COG3914. InterPro: TPR repeat (IPR001440). no signal peptide no TMH. |
| [B] Magnetococcus sp. (strain MC-1) | MAGSM01545 | A0L852 | Tetratricopeptide TPR_2 repeat protein PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein SMART: Tetratricopeptide domain protein KEGG: gsu:GSU2601 TPR domain/SEC-C motif domain protein |
| [B] Opitutus terrae (strain DSM 11246 / PB90-1) | OPITP00459 | B1ZRQ8 | Tetratricopeptide TPR_2 repeat protein |