List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 243815
proline dehydrogenase activity
This group has 5 members: 5 [E]ukaryota
Fingerprint: SKYMPYG
| [E] Daphnia pulex | DAPPU22785 | estExt_Genewise1Plus.C_2100027 | jgi|Dappu1|204241|estExt_Genewise1Plus.C_2100027 |
| [E] Dictyostelium discoideum | DICDI03770 | PROD_DICDI | |
| [E] Schizosaccharomyces pombe | SCHPO05124 | PROD_SCHPO | proline dehydrogenase (predicted); involved in proline catabolism (predicted); involved in glutamate biosynthesis (predicted); proline dehydrogenase activity (predicted); localization mitochondrion (predicted); similar to S. cerevisiae YLR142W PATH:MAP00330; aspect=P; term=proline catabolism; GOid=GO:0004657@[ISS]; GO:0005759@[ISS]; GO:0006537@[ISS]; GO:0006562@[ISS]; evidence=ISS; db_xref=GOC:unpublished; with=SPTR:P09368; date=20030609 aspect=P; term=glutamate biosynthesis; GOid=GO:0006537; evidence=ISS; db_xref=GOC:unpublished; with=SPTR:P09368; date=20030609 aspect=F; term=proline dehydrogenase; GOid=GO:0004657; evidence=ISS; db_xref=GOC:unpublished; with=SPTR:P09368; date=20030609 |
| [E] Populus trichocarpa | POPTR01363 | B9H3T1 | jgi|Poptr1_1|199082|gw1.IV.4171.1 |
| [E] Arabidopsis thaliana | ARATH23453 | Q6NKX1 | proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative, similar to proline oxidase, mitochondrial precursor (Osmotic stress- induced proline dehydrogenase) (Arabidopsis thaliana) SWISS-PROT:P92983; go_component: mitochondrion [goid GO:0004657@[IEA,ISS]; GO:0006537@[IEA,ISS]; GO:0006562@[IEA,ISS]; GO:0005739@[NR]] [evidence IEA]; go_function: proline dehydrogenase activity [goid GO:0004657] [evidence IEA]; go_function: proline dehydrogenase activity [goid GO:0004657] [evidence ISS]; go_process: glutamate biosynthesis [goid GO:0006537] [evidence IEA]; go_process: glutamate biosynthesis [goid GO:0006537] [evidence ISS]; go_process: proline catabolism [goid GO:0006562] [evidence IEA]; go_process: proline catabolism [goid GO:0006562] [evidence ISS] proline dehydrogenase |