List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 248813

formate-tetrahydrofolate ligase
This group has 8 members: 1 [A]rchaea 7 [B]acteria
Fingerprint: RALKYQA

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)HALLT01213  UniProtKB/TrEMBL B9LN91  Formate-tetrahydrofolate ligase FTHFS
[B] Lactobacillus acidophilusLACAC01083  UniProtKB/Swiss-Prot FTHS1_LACAC  COG2759 Formyltetrahydrofolate synthetase formate-tetrahydrofolate ligase
[B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081)LACDA00966   CAI97822.1  Formate-tetrahydrofolate ligase
[B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365)LACDB00804  UniProtKB/Swiss-Prot FTHS_LACDB  Formyltetrahydrofolate synthetase
[B] Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)LACGA00915  UniProtKB/Swiss-Prot FTHS_LACGA  Formyltetrahydrofolate synthetase
[B] Lactobacillus helveticus (strain DPC 4571)LACH400964  UniProtKB/TrEMBL A8YVI9  Formate-tetrahydrofolate ligase
[B] Lactobacillus johnsoniiLACJO01025  UniProtKB/Swiss-Prot FTHS_LACJO  formyltetrahydrofolate synthetase
[B] Mycoplasma penetransMYCPE00856  UniProtKB/Swiss-Prot FTHS_MYCPE  formate-tetrahydrofolate ligase