List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 40716

TPR repeat-containing protein
This group has 6 members: 6 [B]acteria
Fingerprint: EPRSNLL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bradyrhizobium japonicumBRAJA04399  UniProtKB/TrEMBL Q89LU2  Blr4451 protein
[B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB05236  UniProtKB/TrEMBL A5EN32  Putative O-linked N-acetylglucosamine transferase, SPINDLY family
[B] Burkholderia ambifaria (strain MC40-6)BURA400159  UniProtKB/TrEMBL B1YQR8  TPR repeat-containing protein
[B] Burkholderia cepacia (strain ATCC 53795 / AMMD)BURCM00148  UniProtKB/TrEMBL Q0BJG4  TPR repeat-containing protein PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein SMART: Tetratricopeptide domain protein KEGG: bur:Bcep18194_A3338 TPR repeat protein
[B] Burkholderia sp. (strain 383)BURS300157  UniProtKB/TrEMBL Q39KS6  TPR repeat protein
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP802967  UniProtKB/TrEMBL B2JJ64  TPR repeat-containing protein