List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 16341

Ornithine carbamoyltransferase
This group has 50 members: 2 [A]rchaea 48 [B]acteria
Fingerprint: QVISRMT

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Haloarcula marismortuiHALMA02360  UniProtKB/TrEMBL Q5UZ54  ornithine carbamoyltransferase
[A] Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)NATPD02579  UniProtKB/TrEMBL Q3IMD4  ornithine carbamoyltransferase (EC 2.1.3.3)
[B] Chlorobium tepidumCHLTE01098  UniProtKB/Swiss-Prot OTC_CHLTE  Ornithine carbamoyltransferase
[B] Chloroherpeton thalassium (strain ATCC 35110 / GB-78)CHLT302257  UniProtKB/TrEMBL B3QWH1  Ornithine carbamoyltransferase
[B] Pelodictyon luteolum (strain DSM 273)PELLD01010  UniProtKB/TrEMBL Q3B423  Ornithine carbamoyltransferase
[B] Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)LISW601600  UniProtKB/TrEMBL A0AJ36  ArgF protein
[B] Hyphomonas neptunium (strain ATCC 15444)HYPNA00586  UniProtKB/Swiss-Prot OTC_HYPNA  Ornithine carbamoyltransferase
[B] Ehrlichia chaffeensis (strain Arkansas)EHRCR00072  UniProtKB/TrEMBL Q2GI26  ornithine carbamoyltransferase identified by similarity to SP:Q51742; match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658
[B] Novosphingobium aromaticivorans (strain DSM 12444)NOVAD03113  UniProtKB/Swiss-Prot OTC_NOVAD  Ornithine carbamoyltransferase
[B] Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)SPHWW01396  UniProtKB/Swiss-Prot OTC_SPHWW  Ornithine carbamoyltransferase
[B] Zymomonas mobilisZYMMO00405  UniProtKB/TrEMBL Q5NQH1  COG0078 ornithine carbamoyltransferase
[B] Bordetella bronchisepticaBORBR01976  UniProtKB/Swiss-Prot OTC_BORBR  ortholog of Bordetella pertussis (BX470248) BP3538 ornithine carbamoyltransferase
[B] Bordetella parapertussisBORPA02510  UniProtKB/Swiss-Prot OTC_BORPA  ortholog of Bordetella pertussis (BX470248) BP3538 ornithine carbamoyltransferase
[B] Bordetella pertussisBORPE03231  UniProtKB/Swiss-Prot OTC_BORPE  Similar to Pseudomonas aeruginosa anabolic ornithine carbamoyltransferase ArgF SW:OTCA_PSEAE (P11724) (304 aa) fasta scores: E(): 3e-62, 54.69% id in 298 aa, and to Pseudomonas syringae phaseolotoxin-sensitive, anabolic ornithine carbamoyltransferase ArgF SW:OTCA_PSESH (Q02047) (306 aa) fasta scores: E(): 1.2e-61, 53.53% id in 297 aa. Possible alternative translational start site ornithine carbamoyltransferase
[B] Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD02628  UniProtKB/TrEMBL A9IQ87  ArgF protein
[B] Burkholderia multivorans (strain ATCC 17616 / 249)BURM102668  UniProtKB/TrEMBL A9AGJ6  Ornithine carbamoyltransferase
[B] Burkholderia sp. (strain 383)BURS302692  UniProtKB/Swiss-Prot OTC_BURS3  Ornithine carbamoyltransferase
[B] Burkholderia phymatum (strain DSM 17167 / STM815)BURP800524  UniProtKB/TrEMBL B2JDU5  Ornithine carbamoyltransferase
[B] Burkholderia xenovorans (strain LB400)BURXL03550  UniProtKB/TrEMBL Q13UR2  Ornithine carbamoyltransferase
[B] Polynucleobacter necessarius (strain STIR1)POLNS01230  UniProtKB/TrEMBL B1XRS7  Ornithine carbamoyltransferase
[B] Polynucleobacter sp. (strain QLW-P1DMWA-1)POLSQ01742  UniProtKB/TrEMBL A4SZQ3  Ornithine carbamoyltransferase
[B] Ralstonia pickettii (strain 12J)RALPJ02722  UniProtKB/Swiss-Prot OTC_RALPJ  Ornithine carbamoyltransferase
[B] Ralstonia solanacearumRALSO02529  UniProtKB/Swiss-Prot OTC_RALSO  Product confidence : probable Gene name confidence : putative predicted by Codon_usage predicted by Homology predicted by FrameD PROBABLE ORNITHINE CARBAMOYLTRANSFERASE PROTEIN
[B] Acidovorax avenae subsp. citrulli (strain AAC00-1)ACIAC01102  UniProtKB/Swiss-Prot OTC_ACIAC  ornithine carbamoyltransferase KEGG: pol:Bpro_3573 ornithine carbamoyltransferase TIGRFAM: ornithine carbamoyltransferase PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
[B] Acidovorax sp. (strain JS42)ACISJ02787  UniProtKB/TrEMBL A1WA63  ornithine carbamoyltransferase KEGG: pol:Bpro_3573 ornithine carbamoyltransferase TIGRFAM: ornithine carbamoyltransferase PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
[B] Delftia acidovorans (strain DSM 14801 / SPH-1)DELAS02154  UniProtKB/TrEMBL A9BYS3  Ornithine carbamoyltransferase
[B] Diaphorobacter sp. (strain TPSY)DIAST02360  UniProtKB/TrEMBL B9MCT4  Ornithine carbamoyltransferase
[B] Thiobacillus denitrificans (strain ATCC 25259)THIDA01849  UniProtKB/TrEMBL Q3SHT0  ornithine carbamoyltransferase
[B] Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)NITMU01006  UniProtKB/TrEMBL Q2YA76  ornithine carbamoyltransferase
[B] Azoarcus sp. (strain BH72)AZOSB02178  UniProtKB/Swiss-Prot OTC_AZOSB  ArgF protein Ornithine carbamoyltransferase, argF. Similar to sprot|OTC_NITEU (76%) and to sprot|OTC_RALSO (71%). The ornithine carbamoyltransferases are a family of enzymes that catalyse the production of citrulline from carbamoyl-phosphate and ornithine. This reaction is part of the arginine biosynthetic pathway. TIGRFAM: ornithine carbamoyltransferase High confidence in function and specificity
[B] Azoarcus sp. (strain EbN1)AZOSE02820  UniProtKB/Swiss-Prot OTC_AZOSE  Ornithine carbamoyltransferase
[B] Desulfococcus oleovorans (strain DSM 6200 / Hxd3)DESOH02477  UniProtKB/TrEMBL A8ZW62  Ornithine carbamoyltransferase
[B] Campylobacter fetus subsp. fetus (strain 82-40)CAMFF01492  UniProtKB/Swiss-Prot OTC_CAMFF  ornithine carbamoyltransferase identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658
[B] Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251)SULDN00385  UniProtKB/Swiss-Prot OTC_SULDN  Ornithine carbamoyltransferase
[B] Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)SACD202426  UniProtKB/TrEMBL Q21HX8  Ornithine carbamoyltransferase
[B] Serratia proteamaculans (strain 568)SERP503166  UniProtKB/TrEMBL A8GGP8  Ornithine carbamoyltransferase
[B] Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573)ALCBS00716  UniProtKB/TrEMBL Q0VRN2  Ornithine carbamoyltransferase
[B] Pseudomonas aeruginosaPSEAE03529  UniProtKB/Swiss-Prot OTC_PSEAE  Ornithine carbamoyltransferase
[B] Pseudomonas aeruginosa (strain LESB58)PSEA801480  UniProtKB/TrEMBL B7UUV9  Ornithine carbamoyltransferase, anabolic
[B] Pseudomonas aeruginosa (strain UCBPP-PA14)PSEAB01469  UniProtKB/TrEMBL Q02R08  ornithine carbamoyltransferase, anabolic
[B] Pseudomonas entomophila (strain L48)PSEE401095  UniProtKB/TrEMBL Q1IE12  ornithine carbamoyltransferase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1522066, 3592910; Product type e : enzyme
[B] Pseudomonas mendocina (strain ymp)PSEMY03292  UniProtKB/TrEMBL A4XXM8  Ornithine carbamoyltransferase
[B] Pseudomonas putida (strain F1 / ATCC 700007)PSEP101102  UniProtKB/TrEMBL A5VZH1  Ornithine carbamoyltransferase
[B] Pseudomonas putida (strain KT2440)PSEPK01066  UniProtKB/Swiss-Prot OTC_PSEPK  similar to SP:P11724; identified by sequence similarity; putative ornithine carbamoyltransferase
[B] Pseudomonas putida (strain W619)PSEPW01106  UniProtKB/TrEMBL B1J4H5  Ornithine carbamoyltransferase
[B] Pseudomonas stutzeri (strain A1501)PSEU502909  UniProtKB/TrEMBL A4VNU3  Ornithine carbamoyltransferase, anabolic
[B] Ruthia magnifica subsp. Calyptogena magnificaRUTMC00406  UniProtKB/Swiss-Prot OTC_RUTMC  Ornithine carbamoyltransferase
[B] Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA)VESOH00398  UniProtKB/TrEMBL A5CWZ6  Ornithine carbamoyltransferase
[B] Leptospira interrogansLEPIN02816  UniProtKB/Swiss-Prot OTC_LEPIN  Ornithine carbamoyltransferase
[B] Leptospira interrogans (serogroup Icterohaemorrhagiae / serovar Copenhageni)LEPIC01159  UniProtKB/Swiss-Prot OTC_LEPIC  identified by sequence similarity; putative; ORF located using Blastx/Glimmer ornithine carbamoyltransferase