List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 25303
Peptide deformylase
This group has 14 members: 14 [B]acteria
Fingerprint: QRFTIWR
| [B] Microcystis aeruginosa (strain NIES-843) | MICAN02120 | B0JGA5 | Polypeptide deformylase |
| [B] Anabaena sp. (strain PCC 7120) | ANASP01984 | DEF2_ANASP | Peptide deformylase 2 |
| [B] Nostoc punctiforme (strain ATCC 29133 / PCC 73102) | NOSP705983 | B2J0J9 | Peptide deformylase |
| [B] Psychromonas ingrahamii (strain 37) | PSYIN03124 | A1SZU5 | peptide deformylase KEGG: ava:Ava_5067 formylmethionine deformylase TIGRFAM: peptide deformylase PFAM: formylmethionine deformylase |
| [B] Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) | SHEAM00633 | A1S391 | Peptide deformylase KEGG: son:SO1062 polypeptide deformylase |
| [B] Shewanella oneidensis | SHEON01018 | DEF2_SHEON | Peptide deformylase 2 |
| [B] Shewanella sp. (strain MR-4) | SHESM03020 | Q0HFQ9 | Peptide deformylase precursor |
| [B] Shewanella sp. (strain MR-7) | SHESR00927 | Q0HY69 | Peptide deformylase precursor |
| [B] Acinetobacter baumannii (strain AB0057) | ACIB500996 | B7I8N4 | Peptide deformylase |
| [B] Acinetobacter baumannii (strain AB307-0294) | ACIB302602 | B7GXZ8 | Peptide deformylase |
| [B] Acinetobacter baumannii (strain ACICU) | ACIBC00918 | B2HVB3 | N-formylmethionyl-tRNA deformylase |
| [B] Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) | ACIBT00895 | ABO11393.1 | Peptide deformylase 2 |
| [B] Acinetobacter baumannii (strain AYE) | ACIBY02624 | B0V9I4 | Peptide deformylase 2 |
| [B] Acinetobacter sp. (strain ADP1) | ACIAD00939 | Q6FDC9 | Evidence 2b : Function of strongly homologous gene; Product type e : enzyme peptide deformylase 2 |