List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 17568

FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase KEGG:
This group has 8 members: 8 [B]acteria
Fingerprint: QQATHDE

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Rhodococcus sp. (strain RHA1)RHOSR01293  UniProtKB/TrEMBL Q0SH38  Probable D-amino-acid dehydrogenase
[B] Rhizobium lotiRHILO04410  UniProtKB/Swiss-Prot DADA2_RHILO  D-amino acid dehydrogenase, small subunit
[B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK03977  UniProtKB/TrEMBL B9JMP8  D-amino-acid dehydrogenase
[B] Burkholderia cenocepacia (strain AU 1054)BURCA06327  UniProtKB/TrEMBL Q1BGI5  FAD dependent oxidoreductase precursor
[B] Burkholderia cenocepacia (strain HI2424)BURCH06594  UniProtKB/TrEMBL A0KDV7  FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase KEGG: bcn:Bcen_6408 FAD dependent oxidoreductase
[B] Burkholderia cenocepacia (strain MC0-3)BURCC06153  UniProtKB/TrEMBL B1KAW1  FAD dependent oxidoreductase
[B] Burkholderia cepacia (strain ATCC 53795 / AMMD)BURCM03378  UniProtKB/TrEMBL Q0BA75  FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase KEGG: mlo:mlr5698 D-amino acid dehydrogenase, small subunit
[B] Verminephrobacter eiseniae (strain EF01-2)VEREI04348  UniProtKB/TrEMBL A1WRB7  D-amino-acid dehydrogenase precursor