List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 307618

family 57
This group has 14 members: 9 [A]rchaea 5 [B]acteria
Fingerprint: QDGYGPD

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Desulfurococcus kamchatkensis (strain 1221n / DSM 18924)DESK100975  UniProtKB/TrEMBL B8D5C4  Pullulanase, glycoside hydrolase, family 57
[A] Pyrobaculum aerophilumPYRAE02430  UniProtKB/TrEMBL Q8ZT36  Pullulanase
[A] Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)PYRAR01797  UniProtKB/TrEMBL A4WM00  Glycoside hydrolase, family 57 precursor
[A] Pyrobaculum calidifontis (strain JCM 11548 / VA1)PYRCJ01593  UniProtKB/TrEMBL A3MWL6  Glycoside hydrolase, family 57 precursor
[A] Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)PYRIL00974  UniProtKB/TrEMBL A1RT78  Glycoside hydrolase, family 57 precursor
[A] Pyrococcus abyssiPYRAB00180  UniProtKB/TrEMBL Q9V294  Apu amylopullulanase
[A] Pyrococcus furiosusPYRFU01922  UniProtKB/TrEMBL Q8TZQ1  Amylopullulanase
[A] Thermococcus kodakaraensisPYRKO01768  UniProtKB/TrEMBL Q5JJ55  amylopullulanase, GH57 family
[A] Thermococcus onnurineus (strain NA1)THEON01799  UniProtKB/TrEMBL B6YV54  Pullulanase
[B] Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)THET201815  UniProtKB/TrEMBL Q72GM0  Amylopullulanase
[B] Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)THET800158  UniProtKB/TrEMBL Q5SLY5  Alpha-dextran endo-1,6-alpha-glucosidase
[B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT600506  UniProtKB/TrEMBL B5YCY5  Glycoside hydrolase, family 57
[B] Dictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD00619  UniProtKB/TrEMBL B8DZM7  Glycoside hydrolase family 57
[B] Thermosipho melanesiensis (strain BI429 / DSM 12029)THEM400781  UniProtKB/TrEMBL A6LL63  Glycoside hydrolase, family 57 precursor