List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA Group 1209
Cysteine synthase
This group has 15 members: 5 [E]ukaryota 1 [A]rchaea 9 [B]acteria
Fingerprint: YADIREE
| [E] Pristionchus pacificus | PRIPA28340 | WBGene00118172 | status:Partially_confirmed |
| [E] Caenorhabditis brenneri | CAEBI22132 | WBGene00161805 | |
| [E] Caenorhabditis briggsae | CAEBR01434 | CBG01953 | |
| [E] Caenorhabditis japonica | CAEJA12657 | WBGene00132241 | status:Confirmed |
| [E] Leishmania infantum | LEIIN00313 | A4ID39 | cysteine synthase, putative previous systematic id LinJ36.3400 |
| [A] Haloarcula marismortui | HALMA01092 | Q5V2S2 | cysteine synthase |
| [B] Bacteroides fragilis | BACFR03411 | Q64QQ8 | similar to gp:AE016933_139 [Bacteroides thetaiotaomicron VPI-5482], percent identity 85 in 316 aa, BLASTP E(): e-150 cysteine synthase A |
| [B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) | BACFN03162 | Q5LAC7 | Similar to Mycobacterium tuberculosis, and Mycobacterium bovis cysteine synthase A CysK or Rv2334 or MT2397 or MTCY98.03 or MB2362 SWALL:CYSK_MYCTU (SWALL:P95230) (310 aa) fasta scores: E(): 2e-57, 57.51% id in 306 aa, and to Solanum tuberosum cysteine synthase, chloroplast precursor SWALL:CYSL_SOLTU (SWALL:O81155) (386 aa) fasta scores: E(): 1.5e-56, 55.22% id in 306 aa putative cysteine synthase |
| [B] Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) | DEIDV00864 | C1D1D8 | Putative cysteine synthase |
| [B] Deinococcus radiodurans | DEIRA00771 | Q9RW80 | Cysteine synthase |
| [B] Sorangium cellulosum (strain So ce56) | SORC504775 | A9FF28 | CysK4 protein |
| [B] Nitratiruptor sp. (strain SB155-2) | NITSB01469 | A6Q517 | Cysteine synthase A |
| [B] Thermotoga maritima | THEMA00657 | Q9WZD3 | Cysteine synthase |
| [B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) | THEP100266 | A5IJC2 | Cysteine synthase |
| [B] Thermotoga sp. (strain RQ2) | THESQ00261 | B1L8E1 | Cysteine synthase |