List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 1209

Cysteine synthase
This group has 15 members: 5 [E]ukaryota 1 [A]rchaea 9 [B]acteria
Fingerprint: YADIREE

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Pristionchus pacificusPRIPA28340   WBGene00118172  status:Partially_confirmed
[E] Caenorhabditis brenneriCAEBI22132   WBGene00161805  
[E] Caenorhabditis briggsaeCAEBR01434   CBG01953  
[E] Caenorhabditis japonicaCAEJA12657   WBGene00132241  status:Confirmed
[E] Leishmania infantumLEIIN00313  UniProtKB/TrEMBL A4ID39  cysteine synthase, putative previous systematic id LinJ36.3400
[A] Haloarcula marismortuiHALMA01092  UniProtKB/TrEMBL Q5V2S2  cysteine synthase
[B] Bacteroides fragilisBACFR03411  UniProtKB/TrEMBL Q64QQ8  similar to gp:AE016933_139 [Bacteroides thetaiotaomicron VPI-5482], percent identity 85 in 316 aa, BLASTP E(): e-150 cysteine synthase A
[B] Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)BACFN03162  UniProtKB/TrEMBL Q5LAC7  Similar to Mycobacterium tuberculosis, and Mycobacterium bovis cysteine synthase A CysK or Rv2334 or MT2397 or MTCY98.03 or MB2362 SWALL:CYSK_MYCTU (SWALL:P95230) (310 aa) fasta scores: E(): 2e-57, 57.51% id in 306 aa, and to Solanum tuberosum cysteine synthase, chloroplast precursor SWALL:CYSL_SOLTU (SWALL:O81155) (386 aa) fasta scores: E(): 1.5e-56, 55.22% id in 306 aa putative cysteine synthase
[B] Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)DEIDV00864  UniProtKB/TrEMBL C1D1D8  Putative cysteine synthase
[B] Deinococcus radioduransDEIRA00771  UniProtKB/TrEMBL Q9RW80  Cysteine synthase
[B] Sorangium cellulosum (strain So ce56)SORC504775  UniProtKB/TrEMBL A9FF28  CysK4 protein
[B] Nitratiruptor sp. (strain SB155-2)NITSB01469  UniProtKB/TrEMBL A6Q517  Cysteine synthase A
[B] Thermotoga maritimaTHEMA00657  UniProtKB/TrEMBL Q9WZD3  Cysteine synthase
[B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)THEP100266  UniProtKB/TrEMBL A5IJC2  Cysteine synthase
[B] Thermotoga sp. (strain RQ2)THESQ00261  UniProtKB/TrEMBL B1L8E1  Cysteine synthase