List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 246493

Transposase IS200-family protein
This group has 17 members: 4 [A]rchaea 13 [B]acteria
Fingerprint: HLFLSAH

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Sulfolobus tokodaiiSULTO02045  UniProtKB/TrEMBL Q96ZC8  hypothetical transposase
[A] Haloarcula marismortuiHALMA00712  UniProtKB/TrEMBL Q5V3V2  probable transposase
[A] Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541)HALMD00553  UniProtKB/TrEMBL C7NYP4  Transposase IS200-family protein
[A] Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)NATPD02263  UniProtKB/TrEMBL Q3IN98  IS200-type transposase
[B] Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)CALS802496  UniProtKB/TrEMBL A4XMT5  Transposase IS200-family protein
[B] Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)NATTJ00982  UniProtKB/TrEMBL B2A0Y2  Transposase IS200-family protein
[B] Lactobacillus reuteri (strain DSM 20016)LACRD00408  UniProtKB/TrEMBL A5VIL8  Transposase IS200-family protein
[B] Lactobacillus reuteri (strain JCM 1112)LACRJ00408  UniProtKB/TrEMBL B2G651  transposase
[B] Streptococcus suis (strain 05ZYH33)STRSY00674  UniProtKB/TrEMBL A4VU62  Transposase of IS200 family
[B] Streptococcus suis (strain 98HAH33)STRS200675  UniProtKB/TrEMBL A4W0F5  Transposase of IS200 family
[B] Streptococcus suis (strain P1/7)STRSE00609   STRSE_Chromosome.614  pseudo
[B] Streptococcus suis (strain SC84)STRSX00606   STRSX_Chromosome.611  pseudo
[B] Geobacter uraniumreducens (strain Rf4)GEOUR03767  UniProtKB/TrEMBL A5G3E6  Transposase IS200-family protein
[B] Shewanella woodyi (strain ATCC 51908 / MS32)SHEWM02715  UniProtKB/TrEMBL B1KJ08  Transposase IS200-family protein
[B] Photorhabdus luminescens subsp. laumondiiPHOLL00309  UniProtKB/TrEMBL Q7N9L0  Transposase, IS200 family
[B] Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)THEP100960  UniProtKB/TrEMBL A5ILB7  Transposase IS200-family protein
[B] Thermotoga sp. (strain RQ2)THESQ00978  UniProtKB/TrEMBL B1LAJ2  Transposase IS200-family protein