List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 222821

OmpW family outer-membrane protein
This group has 11 members: 11 [B]acteria
Fingerprint: EVAKNGY

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Rickettsia akari (strain Hartford)RICAH00110  UniProtKB/TrEMBL A8GM22  OmpW family outer-membrane protein
[B] Rickettsia bellii (strain OSU 85-389)RICB800022  UniProtKB/TrEMBL A8GUD8  OmpW family outer-membrane protein
[B] Rickettsia bellii (strain RML369-C)RICBR00022  UniProtKB/Swiss-Prot Y022_RICBR  OmpW family outer-membrane protein
[B] Rickettsia canadensis (strain McKiel)RICCK00073  UniProtKB/TrEMBL A8EXE3  Hypothetical outer-membrane protein
[B] Rickettsia felisRICFE00057  UniProtKB/Swiss-Prot Y060_RICFE  OmpW family outer-membrane protein
[B] Rickettsia massiliae (strain Mtu5)RICM500069  UniProtKB/TrEMBL A8F0I2  OmpW family outer-membrane protein
[B] Rickettsia prowazekiiRICPR00073   NP_220469.1  unknown
[B] Rickettsia rickettsii (strain Iowa)RICRO00123  UniProtKB/TrEMBL B0BW29  hypothetical protein
[B] Rickettsia rickettsii (strain Sheila Smith)RICRS00118  UniProtKB/TrEMBL A8GQN9  Hypothetical outer-membrane protein
[B] Rickettsia typhiRICTY00053  UniProtKB/Swiss-Prot Y057_RICTY  OmpW-like outer membrane protein
[B] Rickettsia conoriiRICCN00105  UniProtKB/Swiss-Prot Y105_RICCN  Putative outer membrane protein RC0105