List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
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The close groups are made of the set of all
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Note that not all pairs of proteins coming
from close groups are orthologous. If that
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Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
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proteins that have complementary function
(e.g. member of the same metabolic pathway).
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This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
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OMA fingerprint
The fingerprint is a subsequence that is specific to a
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Since the group number is specific to a release, this
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OMA

Keyword Protein Sequence Group Entry

OMA Group 219782

binding periplasmic protein
This group has 100 members: 3 [A]rchaea 97 [B]acteria
Fingerprint: GLDNNLM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Halobacterium salinariumHALSA01427  UniProtKB/TrEMBL Q9HNZ3  Thiamin-binding periplasmic protein homolog
[A] Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)HALS301480  UniProtKB/TrEMBL B0R6K1  ABC-type transport system periplasmic substrate- binding protein
[A] Thermococcus onnurineus (strain NA1)THEON00968  UniProtKB/TrEMBL B6YWI8  Thiamin-binding periplasmic protein
[B] Brucella abortusBRUAB01629  UniProtKB/Swiss-Prot THIB_BRUAB  similar to BR1757, thiamine ABC transporter, thiamine-binding periplasmic binding protein ThiB, thiamine-binding periplasmic binding protein
[B] Brucella abortus (strain 2308)BRUA201756  UniProtKB/Swiss-Prot THIB_BRUA2  Thiamine ABC transporter periplasmic binding protein:Proteobacterial thiamine ABC transporter, periplasmic binding protein:Ba...
[B] Brucella abortus (strain S19)BRUA101565  UniProtKB/TrEMBL B2S7I8  ThiB, thiamine-binding periplasmic binding protein
[B] Brucella canis (strain ATCC 23365 / NCTC 10854)BRUC201681  UniProtKB/TrEMBL A9M7Q2  Thiamin/thiamin pyrophosphate ABC transporter binding protein
[B] Brucella melitensisBRUME00284  UniProtKB/Swiss-Prot THIB_BRUME  Thiamine-binding periplasmic protein precursor
[B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO201508  UniProtKB/TrEMBL A5VSA7  Thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein
[B] Brucella suisBRUSU01688  UniProtKB/Swiss-Prot THIB_BRUSU  similar to SP:P31550; identified by sequence similarity; putative thiamine ABC transporter, thiamine-binding periplasmic binding protein
[B] Brucella suis (strain ATCC 23445 / NCTC 10510)BRUSI03030  UniProtKB/TrEMBL A9WWN2  thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein GO_component: outer membrane-bounded periplasmic space [GO ID 0030288]; GO_function: thiamin pyrophosphate-transporting ATPase activity [GO ID 0015619]; GO_process: thiamin pyrophosphate transport [GO ID 0030974]
[B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)OCHA401124  UniProtKB/TrEMBL A6WY08  Thiamine ABC transporter, periplasmic binding protein precursor
[B] Mesorhizobium sp. (strain BNC1)MESSB03224  UniProtKB/TrEMBL Q11D94  thiamine ABC transporter, periplasmic binding protein TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily thiamine ABC transporter, periplasmic binding protein KEGG: mlo:mll3867 thiamin ABC transporter, periplasmic-binding protein
[B] Rhizobium lotiRHILO02979  UniProtKB/TrEMBL Q98FA3  thiamin ABC transporter, periplasmic-binding protein
[B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK03531  UniProtKB/TrEMBL B9JDY3  ABC transporter, substrate binding protein
[B] Agrobacterium tumefaciens (strain C58 / ATCC 33970)AGRT502641  UniProtKB/TrEMBL Q7CWF2  ABC transporter, substrate binding protein
[B] Rhizobium melilotiRHIME03210  UniProtKB/TrEMBL Q92L33  Product confidence : putative Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN
[B] Sinorhizobium medicae (strain WSM419)SINMW03049  UniProtKB/TrEMBL A6UE53  ABC transporter, periplasmic binding protein, thiB subfamily precursor
[B] Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)RHOS402999  UniProtKB/TrEMBL Q3IY14  TIGRFam: sufA (ABC transporter periplasmic binding protein), thiB (thiamine ABC transporter, periplasmic binding protein). ABC thiamine transporter, periplasmic substrate-binding protein
[B] Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS502680  UniProtKB/TrEMBL A4WWC1  ABC transporter, periplasmic binding protein, thiB subfamily precursor
[B] Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)RHOS100058  UniProtKB/TrEMBL A3PFR2  ABC transporter, periplasmic binding protein, thiB subfamily TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; thiamine ABC transporter, periplasmic binding protein KEGG: rsp:RSP_1391 ABC thiamine transporter, periplasmic substrate-binding protein
[B] Silicibacter sp. (strain TM1040)SILST02808  UniProtKB/TrEMBL Q1GCR6  ABC transporter periplasmic binding protein, thiB subfamily TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily: (1e-119) thiamine ABC transporter, periplasmic binding protein: (2.3e-118) KEGG: rsp:RSP_1391 ABC thiamine transporter, periplasmic substrate-binding protein, ev=1e-131, 70% identity
[B] Bdellovibrio bacteriovorusBDEBA00537  UniProtKB/TrEMBL Q6MQ87  InterPro: Bacterial extracellular solute-binding protein family 1, thiB; thiamine ABC transporter, thiamine-binding periplasmic binding protein hypothetical protein thiamine ABC transporter
[B] Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)AERHH00841  UniProtKB/TrEMBL A0KGM3  thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein identified by similarity to SP:P31550; match to protein family HMM PF01547; match to protein family HMM TIGR01254; match to protein family HMM TIGR01276
[B] Aeromonas salmonicida (strain A449)AERS403084  UniProtKB/TrEMBL A4SR68  ABC-type thiamine transporter, periplasmic binding protein
[B] Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8)MARAV01138  UniProtKB/TrEMBL A1TZX2  ABC transporter, periplasmic binding protein, thiB subfamily TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; thiamine ABC transporter, periplasmic binding protein PFAM: extracellular solute-binding protein, family 1 KEGG: vch:VC2539 thiamine transport system substrate-binding protein
[B] Psychromonas ingrahamii (strain 37)PSYIN00369  UniProtKB/TrEMBL A1SRY1  thiamine ABC transporter, periplasmic binding protein TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; thiamine ABC transporter, periplasmic binding protein KEGG: vfi:VF0267 thiamine-binding protein
[B] Enterobacter sp. (strain 638)ENT3800611  UniProtKB/TrEMBL A4W6H2  Thiamine ABC transporter, periplasmic binding protein precursor
[B] Erwinia tasmaniensis (strain DSM 17950 / ET1/99)ERWT900735  UniProtKB/TrEMBL B2VD98  Thiamine-binding periplasmic protein
[B] Escherichia coli (strain 55989 / EAEC)ECO5500064  UniProtKB/TrEMBL B7L4I9  Thiamin transporter subunit ; periplasmic-binding component of ABC superfamily
[B] Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks)ECOLC03488  UniProtKB/TrEMBL B1IRB0  Thiamine ABC transporter, periplasmic binding protein precursor
[B] Escherichia coli (strain K12)ECOLI00064  UniProtKB/Swiss-Prot THIB_ECOLI  Thiamine-binding periplasmic protein
[B] Escherichia coli (strain SE11)ECOSE00067  UniProtKB/TrEMBL B6HZ48  Thiamin ABC transporter substrate binding component
[B] Escherichia coli (strain SMS-3-5 / SECEC)ECOSM00072  UniProtKB/TrEMBL B1LG04  Thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein
[B] Escherichia coli (strain UTI89 / UPEC)ECOUT00076  UniProtKB/TrEMBL Q1RGC8  thiamine-binding periplasmic protein precursor
[B] Escherichia coli O127:H6 (strain E2348/69 / EPEC)ECO2700072  UniProtKB/TrEMBL B7UIB9  Thiamin transporter subunit TbpA
[B] Escherichia coli O139:H28 (strain E24377A / ETEC)ECO2400068  UniProtKB/TrEMBL A7ZHF9  Thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein
[B] Escherichia coli O157:H7ECO5700072  UniProtKB/TrEMBL B2NWT5  Residues 1 to 327 of 327 are 99.69 pct identical to residues 1 to 327 of 327 from Escherichia coli K-12 Strain MG1655: B0068 thiamin-binding periplasmic protein
[B] Escherichia coli O157:H7 (strain EC4115 / EHEC)ECO5E00068  UniProtKB/TrEMBL B5YZA4  Thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein
[B] Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)ECOLU00067  UniProtKB/TrEMBL B7N7U2  Thiamin transporter subunit ; periplasmic-binding component of ABC superfamily
[B] Escherichia coli O1:K1 / APECECOK100063  UniProtKB/TrEMBL A1A7B7  thiamine-binding periplasmic protein
[B] Escherichia coli O45:K1 (strain S88 / ExPEC)ECO4500071  UniProtKB/TrEMBL B7MAJ3  Thiamin transporter subunit ; periplasmic-binding component of ABC superfamily
[B] Escherichia coli O6ECOL600081  UniProtKB/TrEMBL Q8CWE5  Thiamine-binding periplasmic protein
[B] Escherichia coli O6:K15:H31 (strain 536)ECOL500071  UniProtKB/TrEMBL Q0TLS0  thiamine-binding periplasmic protein precursor
[B] Escherichia coli O7:K1 (strain IAI39 / ExPEC)ECO7I00071  UniProtKB/TrEMBL B7NHH6  Thiamin transporter subunit ; periplasmic-binding component of ABC superfamily
[B] Escherichia coli O81 (strain ED1a)ECO8100068  UniProtKB/TrEMBL B7MNS7  Thiamin transporter subunit ; periplasmic-binding component of ABC superfamily
[B] Escherichia coli O9:H4 (strain HS)ECOHS00069  UniProtKB/TrEMBL A7ZW18  Thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein
[B] Klebsiella pneumoniae (strain 342)KLEP304556  UniProtKB/TrEMBL B5Y1X5  Thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein
[B] Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)KLEP700066  UniProtKB/TrEMBL A6T4K6  Thiamin-binding periplasmic protein
[B] Erwinia carotovora (subsp. atroseptica)ERWCT03809  UniProtKB/TrEMBL Q6D0F5  Similar to Escherichia coli thiamine-binding periplasmic protein precursor TbpA or ThiB or b0068 SWALL:TBPA_ECOLI (SWALL:P31550) (327 aa) fasta scores: E(): 3.9e-102, 73.31% id in 326 aa thiamine-binding periplasmic protein precursor
[B] Photorhabdus luminescens (subsp. laumondii)PHOLL00604  UniProtKB/TrEMBL Q7N8U8  Thiamine-binding periplasmic protein precursor
[B] Proteus mirabilis (strain HI4320)PROMH02297  UniProtKB/TrEMBL B4F2H0  Thiamine ABC transporter, substrate-binding protein
[B] Salmonella dublin (strain CT_02021853)SALDC00103  UniProtKB/TrEMBL B5FI51  Thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein
[B] Salmonella enteritidis PT4 (strain P125109)SALEP00104  UniProtKB/TrEMBL B5R1U5  Thiamine-binding periplasmic protein
[B] Salmonella gallinarum (strain 287/91 / NCTC 13346)SALG200104  UniProtKB/TrEMBL B5RGD9  Thiamine-binding periplasmic protein
[B] Salmonella heidelberg (strain SL476)SALHS00106  UniProtKB/TrEMBL B4TJ65  Thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein
[B] Salmonella newport (strain SL254)SALNS00111  UniProtKB/TrEMBL B4SU29  Thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein
[B] Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)SALPB00134  UniProtKB/TrEMBL A9MYP4  Putative uncharacterized protein
[B] Salmonella paratyphi A (strain AKU_12601)SALPK00108  UniProtKB/TrEMBL B5BL49  Thiamine-binding periplasmic protein
[B] Salmonella paratyphi-aSALPA00102  UniProtKB/TrEMBL Q5PDF6  similar to Salmonella typhi CT18 thiamine-binding periplasmic protein precursor thiamine-binding periplasmic protein precursor
[B] Salmonella typhiSALTI00110  UniProtKB/TrEMBL Q8XGL6  Thiamine-binding periplasmic protein
[B] Salmonella typhimuriumSALTY00105  UniProtKB/TrEMBL C9X6A1  similar to Escherichia coli thiamin-binding periplasmic protein (AAC73179.1) thiamine-binding periplasmic protein
[B] Serratia proteamaculans (strain 568)SERP500728  UniProtKB/TrEMBL A8G9Q3  Thiamine ABC transporter, periplasmic binding protein precursor
[B] Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)SHIB300052  UniProtKB/TrEMBL B2U274  Thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein
[B] Shigella boydii serotype 4 (strain Sb227)SHIBS00052  UniProtKB/TrEMBL Q326G7  Code: H; COG: COG4143 thiamin-binding periplasmic protein
[B] Shigella dysenteriae serotype 1 (strain Sd197)SHIDS00080  UniProtKB/TrEMBL Q32K26  Code: H; COG: COG4143 thiamin-binding periplasmic protein
[B] Shigella flexneriSHIFL00062   NP_706021.1  Residues 1 to 318 of 318 are 98 pct identical to residues 10 to 327 of a 327 aa protein from Escherichia coli K12 ref: NP_414610.1 thiamin-binding periplasmic protein
[B] Shigella flexneri serotype 5b (strain 8401)SHIF800057  UniProtKB/TrEMBL Q0T8C9  thiamin-binding periplasmic protein Code: H; COG: COG4143
[B] Shigella sonnei (strain Ss046)SHISS00064  UniProtKB/TrEMBL Q3Z5U3  Code: H; COG: COG4143 thiamin-binding periplasmic protein
[B] Sodalis glossinidius (strain morsitans)SODGM00426  UniProtKB/TrEMBL Q2NVW7  thiamine ABC transporter periplasmic component
[B] Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)YERE800601  UniProtKB/TrEMBL A1JJG5  Thiamine-binding periplasmic protein
[B] Yersinia pestisYERPE00492  UniProtKB/TrEMBL A6BUY2  Thiamine-binding periplasmic protein
[B] Yersinia pestis (biovar Antiqua strain Antiqua)YERPA03367  UniProtKB/TrEMBL Q1C1Y7  Thiamine-binding periplasmic protein precursor
[B] Yersinia pestis (biovar Antiqua strain Nepal516)YERPN00381  UniProtKB/TrEMBL Q1CMQ1  Thiamine-binding periplasmic protein precursor
[B] Yersinia pestis (strain Pestoides F)YERPP02936  UniProtKB/TrEMBL A4TQA8  Thiamine-binding periplasmic protein precursor
[B] Yersinia pestis bv. Antiqua (strain Angola)YERPG02523  UniProtKB/TrEMBL A9R149  Thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein
[B] Yersinia pseudotuberculosisYERPS00658  UniProtKB/TrEMBL Q66EM9  ABC transporter, periplasmic thiamine binding protein tbpA
[B] Yersinia pseudotuberculosis serotype IB (strain PB1/+)YERPB00664  UniProtKB/TrEMBL B2K4B8  Thiamine ABC transporter, periplasmic binding protein precursor
[B] Yersinia pseudotuberculosis serotype O:3 (strain YPIII)YERPY03472  UniProtKB/TrEMBL B1JKV2  Thiamine ABC transporter, periplasmic binding protein precursor
[B] Marinomonas sp. (strain MWYL1)MARMS03408  UniProtKB/TrEMBL A6W0Z6  Thiamine ABC transporter, periplasmic binding protein precursor
[B] Actinobacillus pleuropneumoniae serotype 3 (strain JL03)ACTPJ00173  UniProtKB/TrEMBL B0BS79  Thiamine-binding periplasmic protein
[B] Actinobacillus pleuropneumoniae serotype 5b (strain L20)ACTP200173  UniProtKB/TrEMBL A3MYP6  Thiamine-binding periplasmic protein
[B] Actinobacillus pleuropneumoniae serotype 7 (strain AP76)ACTP700176  UniProtKB/TrEMBL B3H016  Thiamine-binding periplasmic protein
[B] Actinobacillus succinogenes (strain ATCC 55618 / 130Z)ACTSZ01111  UniProtKB/TrEMBL A6VNE8  Thiamine ABC transporter, periplasmic binding protein precursor
[B] Haemophilus ducreyiHAEDU00507  UniProtKB/TrEMBL Q7VNE8  thiamine-binding periplasmic protein
[B] Haemophilus parasuis serovar 5 (strain SH0165)HAEPS01124  UniProtKB/TrEMBL B8F695  Thiamine-binding periplasmic protein
[B] Pasteurella multocidaPASMU00376  UniProtKB/TrEMBL Q9CNQ1  TbpA
[B] Aliivibrio salmonicida (strain LFI1238)ALISL00274  UniProtKB/TrEMBL B6EPV6  Thiamine-binding periplasmic protein
[B] Vibrio fischeri (strain MJ11)VIBFM00253  UniProtKB/TrEMBL B5FGE6  Thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein
[B] Photobacterium profundumPHOPR00379  UniProtKB/TrEMBL Q6LV30  putative ABC-type thiamine transport system,periplasmic component
[B] Vibrio choleraeVIBCH02495  UniProtKB/TrEMBL A1EM05  similar to GB:D10483 SP:P31550 GB:U09984 PID:216488 PID:497658; identified by sequence similarity; putative thiamin ABC transporter, periplasmic thiamin-binding protein
[B] Vibrio cholerae (strain ATCC 39541 / O395)VIBC301982  UniProtKB/TrEMBL A5F596  Thiamine ABC transporter, periplasmic thiamin- binding protein
[B] Vibrio cholerae serotype O1 (strain M66-2)VIBCM02408  UniProtKB/TrEMBL C3LRK2  
[B] Vibrio fischeri (strain ATCC 700601 / ES114)VIBF100267  UniProtKB/TrEMBL Q5E884  thiamine-binding protein
[B] Vibrio harveyi (strain ATCC BAA-1116 / BB120)VIBHB00665  UniProtKB/TrEMBL A7MWE3  Putative uncharacterized protein
[B] Vibrio parahaemolyticusVIBPA00316  UniProtKB/TrEMBL Q87SV6  similar to GB:AAF95680.1 (AE004323) percent identity 78 in 330 aa thiamin ABC transporter, periplasmic thiamin-binding protein
[B] Vibrio splendidus (strain LGP32)VIBSL02593  UniProtKB/TrEMBL B7VKW4  Thiamine-binding periplasmic protein
[B] Vibrio vulnificusVIBVU00663  UniProtKB/TrEMBL Q8DE93  COG4143 ABC-type thiamine transport system, periplasmic component
[B] Vibrio vulnificus (strain YJ016)VIBVY00435  UniProtKB/TrEMBL Q7MPC7  Thiamine ABC transporter, periplasmic thiamin- binding protein
[B] Treponema denticolaTREDE00143  UniProtKB/TrEMBL Q73RE6  identified by similarity to SP:P31550; match to protein family HMM PF01547; match to protein family HMM TIGR01254 thiamine ABC transporter, thiamine-binding protein