List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 231790

phosphate cyclase
This group has 15 members: 1 [E]ukaryota 9 [A]rchaea 5 [B]acteria
Fingerprint: GSTPLLF

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Erinaceus europaeusERIEU10675  Ensembl ENSEEUP00000001048   -
[A] Aeropyrum pernixAERPE00379   BAA79476.2  Probable RNA 3'-terminal phosphate cyclase
[A] Sulfolobus acidocaldariusSULAC00519  UniProtKB/Swiss-Prot RTCA_SULAC  RNA 3'-terminal phosphate cyclase
[A] Thermofilum pendens (strain Hrk 5)THEPD00217  UniProtKB/TrEMBL A1RWP7  RNA-3'-phosphate cyclase
[A] Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280)META301441  UniProtKB/TrEMBL A6UX12  RNA-3'-phosphate cyclase
[A] Methanococcus maripaludis (strain C5 / ATCC BAA-1333)METM500944  UniProtKB/TrEMBL A4FYH8  RNA-3'-phosphate cyclase
[A] Methanococcus maripaludis (strain C6 / ATCC BAA-1332)METM600235  UniProtKB/TrEMBL A9A7D8  RNA 3'-phosphate cyclase
[A] Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224)METVS01505  UniProtKB/TrEMBL A6USG5  RNA-3'-phosphate cyclase
[A] Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)METMJ00273  UniProtKB/TrEMBL A3CS58  RNA-3'-phosphate cyclase
[A] Pyrococcus furiosusPYRFU01537  UniProtKB/Swiss-Prot RTCA_PYRFU  Probable RNA 3'-terminal phosphate cyclase
[B] Anaeromyxobacter dehalogenans (strain 2CP-C)ANADE01669  UniProtKB/TrEMBL Q2IIH3  RNA-3'-phosphate cyclase
[B] Anaeromyxobacter sp. (strain Fw109-5)ANADF02106  UniProtKB/TrEMBL A7HC85  RNA-3'-phosphate cyclase
[B] Anaeromyxobacter sp. (strain K)ANASK02158  UniProtKB/TrEMBL B4UD10  RNA 3'-phosphate cyclase
[B] Myxococcus xanthus (strain DK 1622)MYXXD03646  UniProtKB/TrEMBL Q1D5T2  RNA 3'-terminal phosphate cyclase identified by similarity to SP:P46849; match to protein family HMM PF01137; match to protein family HMM PF05189
[B] Syntrophus aciditrophicus (strain SB)SYNAS02543  UniProtKB/TrEMBL Q2LWJ0  RNA 3'-terminal phosphate cyclase