List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 303075

UPF0027 protein
This group has 6 members: 6 [A]rchaea
Fingerprint: VHNCGVR

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Methanocaldococcus jannaschiiMETJA00699  UniProtKB/Swiss-Prot Y682_METJA  UPF0027 protein MJ0682
[A] Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280)META300133  UniProtKB/TrEMBL A6UTA4  Putative uncharacterized protein
[A] Methanopyrus kandleriMETKA01681  UniProtKB/Swiss-Prot Y1682_METKA  UPF0027 protein MK1682
[A] Pyrococcus abyssiPYRAB00561  UniProtKB/Swiss-Prot Y560_PYRAB  UPF0027 protein PYRAB05600
[A] Pyrococcus furiosusPYRFU01603  UniProtKB/Swiss-Prot Y1615_PYRFU  UPF0027 protein PF1615
[A] Pyrococcus horikoshiiPYRHO01659  UniProtKB/Swiss-Prot Y1602_PYRHO  UPF0027 protein PH1602