List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 70271

flagellar motor switch protein FliM
This group has 5 members: 5 [B]acteria
Fingerprint: VEVNIIS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Buchnera aphidicola (subsp. Acyrthosiphon pisum)BUCAI00072  UniProtKB/Swiss-Prot FLIM_BUCAI  flagellar motor switch protein FliM
[B] Buchnera aphidicola (subsp. Schizaphis graminum)BUCAP00071  UniProtKB/Swiss-Prot FLIM_BUCAP  flagellar motor switch protein FliM
[B] Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A)BUCA500069  UniProtKB/TrEMBL B8D8N4  Flagellar motor switch protein FliM
[B] Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7)BUCAT00069  UniProtKB/TrEMBL B8D6Y8  Flagellar motor switch protein FliM
[B] Sodalis glossinidius (strain morsitans)SODGM02019  UniProtKB/TrEMBL Q2NR97  flagellar motor switch protein FliM