OMA Group 263535

ribonuclease ph


This group has 836 members: E1 A1 B834

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Download: Darwin Fasta
TaxonProtein IDCross referenceFunction annotation
EOryza sativa subsp. indicaORYSI37746unknown xref logo BGIOSGA040246-PA
AAciduliprofundum boonei (strain DSM 19572 / T469)ACIB400411UniProtKB/TrEMBL B5IAD2Ribonuclease PH
BAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)ACIC502673UniProtKB/TrEMBL C1F3D1tRNA nucleotidyltransferase
BTerriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63)TERRK02293UniProtKB/TrEMBL I3ZI88RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; manually curated
BTerriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4)TERSS00769UniProtKB/TrEMBL E8V6E7ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: aca:ACP_2825 tRNA nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BSolibacter usitatus (strain Ellin6076)SOLUE07537UniProtKB/Swiss-Prot RNPH_SOLUEribonuclease PH KEGG: aba:Acid345_1616 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BChloracidobacterium thermophilum (strain B)CHLTF00297UniProtKB/TrEMBL G2LE15RNAse PH
BKoribacter versatilis (strain Ellin345)KORVE01612UniProtKB/TrEMBL Q1IR82ribonuclease PH pmp logo
BAcidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP)ACIFD01664UniProtKB/TrEMBL C7M109Ribonuclease PH
BArcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018)ARCHD01049UniProtKB/TrEMBL D7BPH4Ribonuclease PH
BMobiluncus curtisii (strain ATCC 43063 / DSM 2711 / V125)MOBCV00087UniProtKB/TrEMBL D6ZI57ribonuclease PH COG: COG0689; Pfam: PF01138,PF03725; InterPro: IPR002381
BCatenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)CATAD07417UniProtKB/TrEMBL C7QB87Ribonuclease PH
BCorynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1)CORA702065UniProtKB/TrEMBL C3PIN6Ribonuclease PH
BCorynebacterium diphtheriae (strain 241)CORD201731UniProtKB/TrEMBL H2GE77ribonuclease PH
BCorynebacterium diphtheriae (strain 31A)CORD301809UniProtKB/TrEMBL H2G6U5ribonuclease PH
BCorynebacterium diphtheriae (strain ATCC 27012 / C7 (beta))CORD701789UniProtKB/TrEMBL H2GWL9ribonuclease PH
BCorynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)CORDI01803UniProtKB/Swiss-Prot RNPH_CORDIRibonuclease PH
BCorynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)COREF02348UniProtKB/Swiss-Prot RNPH_COREFputative ribonuclease CE2401, similar to U00014-5|AAA50880.1| percent identity: 64 in 238 aa pmp logo
BCorynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)CORGL02492UniProtKB/Swiss-Prot RNPH_CORGLRibonuclease PH
BCorynebacterium glutamicum (strain ATCC 13032 / K051)CORGK02406UniProtKB/TrEMBL I0LMA8ribonuclease PH pmp logo
BCorynebacterium glutamicum (strain R)CORGB02457UniProtKB/Swiss-Prot RNPH_CORGBHypothetical protein
BCorynebacterium jeikeium (strain K411)CORJK00472UniProtKB/TrEMBL Q4JX02ribonuclease PH pmp logo
BCorynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717)CORK401341UniProtKB/Swiss-Prot RNPH_CORK4Ribonuclease PH
BCorynebacterium pseudotuberculosis (strain C231)CORP201620UniProtKB/TrEMBL D9QC43Ribonuclease PH
BCorynebacterium pseudotuberculosis (strain FRC41)CORPF01657UniProtKB/TrEMBL D8KPD3Ribonuclease PH
BCorynebacterium pseudotuberculosis (strain I19)CORP901649UniProtKB/TrEMBL E3F8E6Ribonuclease PH
BCorynebacterium resistens (strain DSM 45100 / JCM 12819 / GTC 2026)CORRG00424UniProtKB/TrEMBL F8DY56ribonuclease PH RNase PH
BCorynebacterium ulcerans (strain BR-AD22)CORUB01820UniProtKB/TrEMBL G0CX36ribonuclease PH RNase PH
BCorynebacterium urealyticum (strain ATCC 43042 / DSM 7109)CORU701457UniProtKB/TrEMBL B1VGW9Ribonuclease PH pmp logo
BGordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667)GORB401826UniProtKB/TrEMBL D0L9N7Ribonuclease PH
BAmycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)AMYSD03602UniProtKB/TrEMBL F6ES59Ribonuclease PH
BMycobacterium abscessus (strain ATCC 19977 / DSM 44196)MYCA901465UniProtKB/Swiss-Prot RNPH_MYCA9Probable ribonuclease PH
BMycobacterium avium (strain 104)MYCA101469UniProtKB/Swiss-Prot RNPH_MYCA1ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BMycobacterium paratuberculosis (strain ATCC BAA-968 / K-10)MYCPA02396UniProtKB/Swiss-Prot RNPH_MYCPARibonuclease PH
BMycobacterium gilvum (strain PYR-GCK)MYCGI02275UniProtKB/Swiss-Prot RNPH_MYCGIribonuclease PH TIGRFAM: ribonuclease PH KEGG: mmc:Mmcs_3844 ribonuclease PH
BMycobacterium sp. (strain Spyr1)MYCSR01674UniProtKB/TrEMBL E6TAC9 pmp logo
BMycobacterium leprae (strain Br4923)MYCLB01161UniProtKB/Swiss-Prot RNPH_MYCLBRibonuclease PH
BMycobacterium leprae (strain TN)MYCLE01160UniProtKB/Swiss-Prot RNPH_MYCLERibonuclease PH
BMycobacterium marinum (strain ATCC BAA-535 / M)MYCMM03947UniProtKB/TrEMBL B2HQF7Ribonuclease RphA
BMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)MYCS204626UniProtKB/Swiss-Prot RNPH_MYCS2Ribonuclease PH
BMycobacterium sp. (strain JLS)MYCSJ03763UniProtKB/Swiss-Prot RNPH_MYCSJribonuclease PH KEGG: mmc:Mmcs_3844 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BMycobacterium sp. (strain KMS)MYCSK03825UniProtKB/Swiss-Prot RNPH_MYCSKribonuclease PH KEGG: mmc:Mmcs_3844 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BMycobacterium sp. (strain MCS)MYCSS03805UniProtKB/Swiss-Prot RNPH_MYCSSRibonuclease PH
BMycobacterium bovis (strain ATCC BAA-935 / AF2122/97)MYCBO03569UniProtKB/Swiss-Prot RNPH_MYCBOPROBABLE RIBONUCLEASE RPHA (RNase PH) (tRNA nucleotidyltransferase) Mb1375, rphA, len: 259 aa. Equivalent to Rv1340, len: 259 aa, from Mycobacterium tuberculosis strain H37Rv, (99.6% identity in 259 aa overlap). Probable rphA, Ribonuclease ph (EC 2.7.7.56), highly similar to others e.g. RNPH_MYCLE|P37939 from Mycobacterium leprae (259 aa), FASTA scores: opt: 1524, E(): 0, (88.8% identity in 259 aa overlap). BELONGS TO THE RNASE PH FAMILY.
BMycobacterium bovis (strain BCG / Pasteur 1173P2)MYCBP01375UniProtKB/Swiss-Prot RNPH_MYCBPProbable ribonuclease rphA
BMycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)MYCBT01364UniProtKB/Swiss-Prot RNPH_MYCBTRibonuclease PH
BMycobacterium canettii (strain CIPT 140010059)MYCCP01343UniProtKB/TrEMBL G0TIE6putative ribonuclease RPHA (RNase PH) (tRNA nucleotidyltransferase)
BMycobacterium tuberculosisMYCTU01355UniProtKB/Swiss-Prot RNPH_MYCTURibonuclease PH pmp logo
BMycobacterium tuberculosis (strain ATCC 25177 / H37Ra)MYCTA01359UniProtKB/Swiss-Prot RNPH_MYCTARibonuclease PH
BMycobacterium tuberculosis (strain CCDC5079)MYCTC01235UniProtKB/TrEMBL F7WI17rph, ribonuclease PH pmp logo
BMycobacterium tuberculosis (strain CCDC5180)MYCTD01222UniProtKB/TrEMBL F7WX25rph, ribonuclease PH pmp logo
BMycobacterium tuberculosis (strain F11)MYCTF01327UniProtKB/TrEMBL A5WM24ribonuclease rphA (RNase ph) Mapped to H37Rv Rv1340 pmp logo
BMycobacterium tuberculosis (strain KZN 1435 / MDR)MYCTK02666UniProtKB/TrEMBL C6DTP5Ribonuclease PH pmp logo
BMycobacterium ulcerans (strain Agy99)MYCUA03162UniProtKB/Swiss-Prot RNPH_MYCUAribonuclease RphA cytoplasmic protein RNase ph is a phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates [catalytic activity: {tRNA}(n+1) + phosphate = {tRNA}(N) + a nucleoside diphosphate]
BMycobacterium vanbaalenii (strain DSM 7251 / PYR-1)MYCVP04137UniProtKB/Swiss-Prot RNPH_MYCVPribonuclease PH KEGG: mmc:Mmcs_3844 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BNocardia cyriacigeorgica (strain GUH-2)NOCCG01152UniProtKB/TrEMBL H6R3M3Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1925027, 1512252; Product type e : enzyme
BNocardia farcinica (strain IFM 10152)NOCFA01102UniProtKB/Swiss-Prot RNPH_NOCFARibonuclease PH
BRhodococcus equi (strain 103S)RHOE101698UniProtKB/TrEMBL E4WG05Ribonuclease PH
BRhodococcus erythropolis (strain PR4 / NBRC 100887)RHOE403871UniProtKB/Swiss-Prot RNPH_RHOE4Ribonuclease PH
BRhodococcus sp. (strain RHA1)RHOSR01396UniProtKB/TrEMBL Q0SGT5TRNA nucleotidyltransferase pmp logo
BRhodococcus opacus (strain B4)RHOOB01141UniProtKB/TrEMBL C1AVV8Ribonuclease PH
BSegniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)SEGRD01499UniProtKB/TrEMBL D6Z7R6Ribonuclease PH
BAcidothermus cellulolyticus (strain ATCC 43068 / 11B)ACIC101680UniProtKB/TrEMBL A0LVJ6ribonuclease PH KEGG: sco:SCO2904 putative ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease pmp logo
BFrankia sp. (strain CcI3)FRASC00848UniProtKB/Swiss-Prot RNPH_FRASCRNAse PH
BFrankia sp. (strain EAN1pec)FRASN05476UniProtKB/Swiss-Prot RNPH_FRASNRibonuclease PH
BFrankia sp. (strain EuI1c)FRASU05698UniProtKB/TrEMBL E3IX17ribonuclease PH PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; manually curated; KEGG: gob:Gobs_1364 ribonuclease PH; TIGRFAM: ribonuclease PH
BFrankia symbiont subsp. Datisca glomerataFRADG01095UniProtKB/TrEMBL F8B0B2Ribonuclease PH KEGG: fri:FraEuI1c_5805 ribonuclease PH; manually curated; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; HAMAP: Ribonuclease phosphorolytic, bacterial-type
BBlastococcus saxobsidens (strain DD2)BLASD01103UniProtKB/TrEMBL H6RW99RNase PH Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512253; Product type e : enzyme
BGeodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)GEOOG01283UniProtKB/TrEMBL D2SBF1Ribonuclease PH
BNakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104)NAKMY01609UniProtKB/TrEMBL C8XFY0Ribonuclease PH
BStackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21)STANL01526UniProtKB/TrEMBL D3PW92Ribonuclease PH
BKineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)KINRD03726UniProtKB/TrEMBL A6WEI7Ribonuclease PH pmp logo
BBeutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432)BEUC102713UniProtKB/TrEMBL C5BY79Ribonuclease PH
BCellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547)CELFA01344UniProtKB/TrEMBL F4H518ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134)CELFN01301UniProtKB/TrEMBL D5UCB0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: bcv:Bcav_2734 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCellvibrio gilvus (strain ATCC 13127 / NRRL B-14078)CELGA02186UniProtKB/TrEMBL F8A0P6ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BBrachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860)BRAFD01922UniProtKB/TrEMBL C7ME06RNAse PH
BKytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541)KYTSD00930UniProtKB/TrEMBL C7NG41RNAse PH
BClavibacter michiganensis subsp. michiganensis (strain NCPPB 382)CLAM301312UniProtKB/TrEMBL A5CQI7Ribonuclease PH
BClavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1)CLAMS02025UniProtKB/TrEMBL B0RFB1Ribonuclease PH pmp logo
BLeifsonia xyli subsp. xyli (strain CTCB07)LEIXX01062UniProtKB/Swiss-Prot RNPH_LEIXXRibonuclease PH
BArthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117)ARTAR01234UniProtKB/TrEMBL E1VV50tRNA nucleotidyltransferase removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BArthrobacter aurescens (strain TC1)ARTAT02450UniProtKB/TrEMBL A1R7S9Ribonuclease PH pmp logo
BArthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360)ARTCA02273UniProtKB/TrEMBL B8HAW4Ribonuclease PH
BArthrobacter sp. (strain FB24)ARTS202554UniProtKB/TrEMBL A0JY40ribonuclease PH KEGG: lxx:Lxx13580 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease pmp logo
BKocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)KOCRD00998UniProtKB/TrEMBL B2GM08Ribonuclease PH
BRenibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)RENSM01406UniProtKB/TrEMBL A9WNP6Ribonuclease PH pmp logo
BRothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA)ROTDC01733UniProtKB/TrEMBL E3H1B2Ribonuclease PH
BRothia mucilaginosa (strain DY-18)ROTMD01263UniProtKB/TrEMBL D2NTX0Ribonuclease PH
BXylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)XYLCX01052UniProtKB/TrEMBL D1BZD9ribonuclease PH KEGG: azo:azo3963 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BTropheryma whipplei (strain TW08/27)TROW800609UniProtKB/Swiss-Prot Q83HF6ribonuclease PH Similar to Escherichia coli ribonuclease PH Rph or b3643 SWALL:RNPH_ECOLI (SWALL:P03842) (238 aa) fasta scores: E(): 5.3e-42, 49.57% id in 236 aa, and to Bifidobacterium longum NCC2705 probable ribonuclease PH bl0286 SWALL:AAN24126 (EMBL:AE014647) (258 aa) fasta scores: E(): 3.3e-46, 54.39% id in 239 aa
BTropheryma whipplei (strain Twist)TROWT00620UniProtKB/Swiss-Prot RNPH_TROWTRibonuclease PH
BActinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431)ACTM400945UniProtKB/TrEMBL I0GZI0putative ribonuclease PH
BActinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)ACTS501054UniProtKB/TrEMBL G8RZ65ribonuclease PH RNase PH
BMicromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442)MICAI01150UniProtKB/TrEMBL D9TD84Ribonuclease PH
BMicromonospora sp. (strain L5)MICSL01397UniProtKB/TrEMBL E8S5F4
BSalinispora arenicola (strain CNS-205)SALAI00968UniProtKB/Swiss-Prot RNPH_SALAIRibonuclease PH
BSalinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440)SALTO01088UniProtKB/Swiss-Prot RNPH_SALTORNAse PH
BKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)KRIFD01807UniProtKB/TrEMBL D2PPH9Ribonuclease PH
BNocardioides sp. (strain BAA-499 / JS614)NOCSJ01280UniProtKB/Swiss-Prot RNPH_NOCSJRibonuclease PH
BPropionibacterium acnes (strain KPA171202 / DSM 16379)PROAC01640UniProtKB/Swiss-Prot RNPH_PROACRibonuclease PH
BPropionibacterium acnes (strain SK137)PROAS01665UniProtKB/TrEMBL D4H979tRNA nucleotidyltransferase identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BPropionibacterium propionicum (strain F0230a)PROPF00884UniProtKB/TrEMBL I6XNC6tRNA nucleotidyltransferase
BActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)ACTMD01000UniProtKB/TrEMBL C6WNQ7Ribonuclease PH
BAmycolatopsis mediterranei (strain U-32)AMYMU07565UniProtKB/TrEMBL D8HSM8ribonuclease PH
BPseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190)PSEUX01447UniProtKB/TrEMBL F4CU39Ribonuclease PH KEGG: sen:SACE_1212 ribonuclease PH; manually curated; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; HAMAP: Ribonuclease phosphorolytic, bacterial-type
BSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)SACVD02795UniProtKB/TrEMBL C7MWC0RNAse PH
BSaccharopolyspora erythraea (strain NRRL 23338)SACEN01173UniProtKB/Swiss-Prot RNPH_SACENRibonuclease PH
BThermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51)THEBD00929UniProtKB/TrEMBL D6Y771ribonuclease PH KEGG: ilo:IL2425 RNase PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BKitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)KITSK02659UniProtKB/TrEMBL E4NBP7putative ribonuclease PH protein synonym:RNase PH protein synonym:tRNA nucleotidyltransferase
BStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680)STRAW05168UniProtKB/Swiss-Prot RNPH_STRAWRibonuclease PH
BStreptomyces bingchenggensis (strain BCW-1)STRBB06682UniProtKB/TrEMBL D7BXR0Ribonuclease PH
BStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)STRCO02175UniProtKB/Swiss-Prot RNPH_STRCOputative ribonuclease PH SCE19A.04c, rph, probable ribonuclease PH, len: 245 aa; highly similar to many e.g. SW:RNPH_ECOLI (EMBL:X00781), rph, Escherichia coli ribonuclease PH (238 aa), fasta scores; opt: 916 z-score: 1116.8 E(): 0, 60.8% identity in 240 aa overlap. Contains Pfam match to entry PF01138 RNase_PH, 3' exoribonuclease family and PS01277 Ribonuclease PH signature
BStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)STRGG04511UniProtKB/Swiss-Prot RNPH_STRGGPutative ribonuclease PH
BStreptomyces scabies (strain 87.22)STRSW05427UniProtKB/TrEMBL C9Z2I8Putative ribonuclease
BNocardiopsis alba (strain ATCC BAA-2165 / BE74)NOCAA03193UniProtKB/TrEMBL J7LDZ4ribonuclease PH
BNocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488)NOCDD00380UniProtKB/TrEMBL D7AVH2ribonuclease PH COGs: COG0689 RNase PH; InterProIPR018336:IPR020568:IPR015847:IPR002381:IPR 001247; KEGG: tfu:Tfu_2365 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: C1YH23 RNAse PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BThermobifida fusca (strain YX)THEFY02356UniProtKB/TrEMBL Q47MC4RNAse PH pmp logo
BStreptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)STRRD01661UniProtKB/TrEMBL D2AT49tRNA nucleotidyltransferase
BThermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081)THECD03783UniProtKB/TrEMBL D1AD85Ribonuclease PH
BBifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8)BIFAR00291UniProtKB/TrEMBL I1W8E0ribonuclease PH COG0689 RNase PH
BBifidobacterium animalis subsp. lactis (strain AD011)BIFA000267UniProtKB/TrEMBL B8DVS5Ribonuclease PH
BBifidobacterium animalis subsp. lactis (strain BB-12)BIFAB00806UniProtKB/TrEMBL D3R3J0Ribonuclease PH
BBifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219)BIFLB00278UniProtKB/TrEMBL C6A6C9Ribonuclease PH
BBifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314)BIFAS00278UniProtKB/TrEMBL C6AGY7Ribonuclease PH
BBifidobacterium animalis subsp. lactis (strain V9)BIFAV00278UniProtKB/TrEMBL D5TFJ1Ribonuclease PH
BBifidobacterium bifidum (strain S17)BIFBS00360UniProtKB/TrEMBL E3EPM8Ribonuclease PH
BBifidobacterium breve (strain ACS-071-V-Sch8b)BIFBA00378UniProtKB/TrEMBL F6C7G5tRNA nucleotidyltransferase
BBifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1)BIFDB00310UniProtKB/TrEMBL D2Q874Rph Ribonuclease PH pmp logo
BBifidobacterium longum (strain DJO10A)BIFLD01014UniProtKB/TrEMBL B3DTK8RNase PH
BBifidobacterium longum (strain NCC 2705)BIFLO00929UniProtKB/Swiss-Prot RNPH_BIFLORibonuclease PH
BBifidobacterium longum subsp. infantis (strain 157F)BIFL100318UniProtKB/TrEMBL E8MRS5putative ribonuclease PH
BBifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12)BIFLS00082UniProtKB/TrEMBL B7GN26ribonuclease PH KEGG: blo:BL0286 probable ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease
BBifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b)BIFL200326UniProtKB/TrEMBL E8MGU6putative ribonuclease PH
BBifidobacterium longum subsp. longum (strain BBMN68)BIFLM01024UniProtKB/TrEMBL E4R093Rph RNase PH pmp logo
BBifidobacterium longum subsp. longum (strain JDM301)BIFLJ00365UniProtKB/TrEMBL D6ZY71Ribonuclease PH pmp logo
BGardnerella vaginalis (strain 409-05)GARV400319UniProtKB/TrEMBL D2R9V8tRNA nucleotidyltransferase
BAtopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546)ATOPD00161UniProtKB/TrEMBL C8W913Ribonuclease PH
BCoriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2)CORGP01372UniProtKB/TrEMBL F2NAP7RNAse PH COGs: COG0689 RNase PH; InterPro IPR018336:IPR002381:IPR001247:IPR015847; KEGG: apv:Apar_0165 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; IMG reference gene:2503576219; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BSlackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1)SLAHD00871UniProtKB/TrEMBL C7N4X1RNAse PH
BConexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)CONWI01854UniProtKB/TrEMBL D3F312ribonuclease PH KEGG: azo:azo3963 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BAquifex aeolicus (strain VF5)AQUAE00645UniProtKB/Swiss-Prot RNPH_AQUAERibonuclease PH
BHydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6)HYDTT00177UniProtKB/TrEMBL D3DFP2Ribonuclease PH
BHydrogenobaculum sp. (strain Y04AAS1)HYDS000851UniProtKB/Swiss-Prot RNPH_HYDS0Ribonuclease PH
BThermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12)THEAH01284UniProtKB/TrEMBL D3SME3Ribonuclease PH
BThermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1)THEA100133UniProtKB/TrEMBL E8T3H6ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: tjr:TherJR_2567 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPersephonella marina (strain DSM 14350 / EX-H1)PERMH00256UniProtKB/Swiss-Prot RNPH_PERMHRibonuclease PH
BSulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825)SULAA00317UniProtKB/TrEMBL C1DT85Ribonuclease PH
BSulfurihydrogenibium sp. (strain YO3AOP1)SULSY00506UniProtKB/Swiss-Prot RNPH_SULSYRibonuclease PH
BChloroflexus aggregans (strain MD-66 / DSM 9485)CHLAD03534UniProtKB/TrEMBL B8GAB7Ribonuclease PH pmp logo
BChloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)CHLAA00240UniProtKB/TrEMBL A9WCA5Ribonuclease PH pmp logo
BChloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)CHLSY00251UniProtKB/TrEMBL B9LHJ0Ribonuclease PH pmp logo
BRoseiflexus castenholzii (strain DSM 13941 / HLO8)ROSCS03825UniProtKB/TrEMBL A7NQX4ribonuclease PH KEGG: rrs:RoseRS_2001 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease pmp logo
BRoseiflexus sp. (strain RS-1)ROSS101928UniProtKB/TrEMBL A5UUT4Ribonuclease PH pmp logo
BDehalococcoides mccartyi (strain ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1)DEHMB01072UniProtKB/Swiss-Prot RNPH_DEHMBRNAse PH TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease
BDehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195)DEHM101168UniProtKB/Swiss-Prot RNPH_DEHM1ribonuclease PH identified by similarity to SP:P28619; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BDehalococcoides mccartyi (strain CBDB1)DEHMC01017UniProtKB/Swiss-Prot RNPH_DEHMCribonuclease PH
BDehalococcoides mccartyi (strain VS)DEHMV01001UniProtKB/TrEMBL D2BIN9ribonuclease PH pmp logo
BDehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9)DEHLB00268UniProtKB/TrEMBL D8K3V0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: deg:DehalGT_1026 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BSphaerobacter thermophilus (strain DSM 20745 / S 6022)SPHTD00421UniProtKB/TrEMBL D1C7N2Ribonuclease PH
BThermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)THERP00422UniProtKB/TrEMBL B9KY88Ribonuclease PH
BDesulfurispirillum indicum (strain ATCC BAA-1389 / S5)DESIS00533UniProtKB/TrEMBL E6W0P1ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: mei:Msip34_0047 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BAnabaena variabilis (strain ATCC 29413 / PCC 7937)ANAVT02616UniProtKB/Swiss-Prot RNPH_ANAVTRNAse PH
BNostoc punctiforme (strain ATCC 29133 / PCC 73102)NOSP702225UniProtKB/Swiss-Prot RNPH_NOSP7Ribonuclease PH
BNostoc sp. (strain PCC 7120 / UTEX 2576)NOSS100067UniProtKB/Swiss-Prot RNPH_NOSS1Ribonuclease PH
BNostoc azollae (strain 0708)NOSA001057UniProtKB/TrEMBL D7E4G9Ribonuclease PH
BAcaryochloris marina (strain MBIC 11017)ACAM102682UniProtKB/Swiss-Prot RNPH_ACAM1Ribonuclease PH
BCyanobium gracile (strain ATCC 27147 / PCC 6307)CYAGP01940UniProtKB/TrEMBL K9P881ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BCyanothece sp. (strain ATCC 51142)CYAA504454UniProtKB/Swiss-Prot RNPH_CYAA5Ribonuclease PH
BCyanothece sp. (strain PCC 7424)CYAP702937UniProtKB/Swiss-Prot RNPH_CYAP7Ribonuclease PH
BCyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP404716UniProtKB/Swiss-Prot RNPH_CYAP4Ribonuclease PH
BSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)SYNP600476UniProtKB/Swiss-Prot RNPH_SYNP6hypothetical protein
BSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)SYNP202044UniProtKB/TrEMBL B1XI78Ribonuclease PH pmp logo
BSynechococcus sp. (strain CC9311)SYNS300312UniProtKB/TrEMBL Q0IDC1Ribonuclease PH pmp logo
BSynechococcus sp. (strain CC9605)SYNSC00263UniProtKB/Swiss-Prot RNPH_SYNSCribonuclease PH
BSynechococcus sp. (strain CC9902)SYNS902054UniProtKB/TrEMBL Q3AUQ5RNAse PH pmp logo
BSynechococcus sp. (strain JA-2-3B'a(2-13))SYNJB01678UniProtKB/Swiss-Prot RNPH_SYNJBribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BSynechococcus sp. (strain JA-3-3Ab)SYNJA02498UniProtKB/Swiss-Prot RNPH_SYNJAribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BSynechococcus sp. (strain WH7803)SYNPW00320UniProtKB/TrEMBL A5GII1Ribonuclease PH pmp logo
BSynechococcus sp. (strain WH8102)SYNPX00276UniProtKB/Swiss-Prot RNPH_SYNPXRibonuclease PH
BThermosynechococcus elongatus (strain BP-1)THEEB00575UniProtKB/Swiss-Prot RNPH_THEEBRibonuclease PH
BLyngbya sp. (strain PCC 8106)LYNSP05591UniProtKB/TrEMBL A0YYX6ribonuclease PH COG0689 RNase PH pmp logo
BTrichodesmium erythraeum (strain IMS101)TRIEI01747UniProtKB/TrEMBL Q113J5Ribonuclease PH pmp logo
BStanieria cyanosphaera (strain ATCC 29371 / PCC 7437)STAC701621UniProtKB/TrEMBL K9XUA4RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR001247:IPR015847:IPR002381; KEGG: ter:Tery_2089 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type
BProchlorococcus marinus (strain MIT 9303)PROM302418UniProtKB/TrEMBL A2CCH6Ribonuclease PH pmp logo
BProchlorococcus marinus (strain MIT 9313)PROMM02353UniProtKB/Swiss-Prot RNPH_PROMMribonuclease PH Alternative locus ID:P9313_23151
BCalditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1)CALNY00572UniProtKB/TrEMBL E4TFM7Ribonuclease PH
BDeferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1)DEFDS00431UniProtKB/TrEMBL D3PBG7Ribonuclease PH
BDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)DEIDV02439UniProtKB/TrEMBL C1CZJ0Putative tRNA nucleotidyltransferase
BDeinococcus geothermalis (strain DSM 11300)DEIGD02059UniProtKB/TrEMBL Q1IWK4ribonuclease PH KEGG: dra:DR1585 ribonuclease PH, ev=1e-107, 80% identity TIGRFAM: ribonuclease PH: (8.2e-53) PFAM: 3' exoribonuclease: (6.4e-27) pmp logo
BDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)DEIRA01544UniProtKB/Swiss-Prot RNPH_DEIRARibonuclease PH
BTruepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24)TRURR00473UniProtKB/TrEMBL D7CS85ribonuclease PH COGs: COG0689 RNase PH; InterPro IPR001247:IPR015847:IPR020568:IPR002381; KEGG: dge:Dgeo_2086 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Q1IWK4 Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BMeiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21)MEIRD01067UniProtKB/TrEMBL D3PQY7Ribonuclease PH
BMeiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2)MEISD01099UniProtKB/TrEMBL D7BDS4Ribonuclease PH
BDictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT601165UniProtKB/Swiss-Prot RNPH_DICT6Ribonuclease PH
BDictyoglomus turgidum (strain Z-1310 / DSM 6724)DICTD01270UniProtKB/Swiss-Prot RNPH_DICTDRibonuclease PH
BFibrobacter succinogenes (strain ATCC 19169 / S85)FIBSS00624UniProtKB/TrEMBL C9RM77Ribonuclease PH
BAnoxybacillus flavithermus (strain DSM 21510 / WK1)ANOFW00582UniProtKB/Swiss-Prot RNPH_ANOFWRibonuclease PH
BBacillus amyloliquefaciens (strain FZB42)BACA202453UniProtKB/Swiss-Prot RNPH_BACA2Rph
BBacillus anthracisBACAN04260UniProtKB/Swiss-Prot RNPH_BACANRibonuclease PH pmp logo
BBacillus anthracis (strain A0248)BACAA04107UniProtKB/Swiss-Prot RNPH_BACAARibonuclease PH
BBacillus anthracis (strain CDC 684 / NRRL 3495)BACAC04578UniProtKB/Swiss-Prot RNPH_BACACRibonuclease PH
BBacillus atrophaeus (strain 1942)BACA102361UniProtKB/TrEMBL E3E0T0ribonuclease PH COG0689 RNase PH
BBacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4)BACCJ03085UniProtKB/TrEMBL E6TZT3ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: bpf:BpOF4_03065 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BBacillus cereus (strain 03BB102)BACC304389UniProtKB/Swiss-Prot RNPH_BACC3Ribonuclease PH
BBacillus cereus (strain AH187)BACC704392UniProtKB/Swiss-Prot RNPH_BACC7Ribonuclease PH
BBacillus cereus (strain AH820)BACC004467UniProtKB/Swiss-Prot RNPH_BACC0Ribonuclease PH
BBacillus cereus (strain ATCC 10987)BACC104534UniProtKB/Swiss-Prot RNPH_BACC1ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725
BBacillus cereus (strain ATCC 14579 / DSM 31)BACCR04284UniProtKB/Swiss-Prot RNPH_BACCRRibonuclease PH
BBacillus cereus (strain B4264)BACC404421UniProtKB/Swiss-Prot RNPH_BACC4Ribonuclease PH
BBacillus cereus (strain G9842)BACC204494UniProtKB/Swiss-Prot RNPH_BACC2Ribonuclease PH
BBacillus cereus (strain Q1)BACCQ04159UniProtKB/Swiss-Prot RNPH_BACCQRibonuclease PH
BBacillus cereus (strain ZK / E33L)BACCZ04193UniProtKB/Swiss-Prot RNPH_BACCZribonuclease PH (RNase PH) (tRNA nucleotidyltransferase)
BBacillus cereus var. anthracis (strain CI)BACAI04215UniProtKB/TrEMBL D8GX96ribonuclease PH pmp logo
BBacillus clausii (strain KSM-K16)BACSK02639UniProtKB/Swiss-Prot RNPH_BACSKribonuclease PH
BBacillus cereus subsp. cytotoxis (strain NVH 391-98)BACCN03044UniProtKB/Swiss-Prot RNPH_BACCNRibonuclease PH
BBacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)BACHD03015UniProtKB/Swiss-Prot RNPH_BACHDRibonuclease PH
BBacillus licheniformis (strain DSM 13 / ATCC 14580)BACLD03096UniProtKB/Swiss-Prot RNPH_BACLDribonuclease PH
BBacillus megaterium (strain DSM 319)BACMD04570UniProtKB/TrEMBL D5DLN7ribonuclease PH
BBacillus pumilus (strain SAFR-032)BACP202446UniProtKB/Swiss-Prot RNPH_BACP2tRNA nucleotidyltransferase
BBacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10)BACIE01358UniProtKB/TrEMBL D6XSY7ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: azo:azo3963 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 pmp logo
BBacillus subtilis (strain BSn5)BACST00993UniProtKB/TrEMBL E8VGF2ribonuclease PH COG0689 RNase PH pmp logo
BBacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23)BACPZ02722UniProtKB/TrEMBL E0TVB8ribonuclease PH
BBacillus subtilis (strain 168)BACSU02949UniProtKB/Swiss-Prot RNPH_BACSUribonuclease PH Evidence 1a: Function experimentally demonstrated in the studied strain; PubMedId: 1624460, 19153445; Product type e: enzyme
BBacillus thuringiensis (strain Al Hakam)BACAH03862UniProtKB/TrEMBL A0RJ97ribonuclease PH pmp logo
BBacillus thuringiensis subsp. finitimus (strain YBT-020)BACT004375UniProtKB/TrEMBL F0PZ26ribonuclease PH COG0689 RNase PH pmp logo
BBacillus thuringiensis subsp. konkukian (strain 97-27)BACHK04151UniProtKB/Swiss-Prot RNPH_BACHKRibonuclease PH
BBacillus weihenstephanensis (strain KBAB4)BACWK04215UniProtKB/Swiss-Prot RNPH_BACWKRibonuclease PH
BGeobacillus kaustophilus (strain HTA426)GEOKA02641UniProtKB/Swiss-Prot RNPH_GEOKAribonuclease PH
BGeobacillus sp. (strain WCH70)GEOSW02254UniProtKB/Swiss-Prot RNPH_GEOSWRibonuclease PH
BGeobacillus sp. (strain Y4.1MC1)GEOS000847UniProtKB/TrEMBL E3IFC0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: gwc:GWCH70_2600 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BGeobacillus sp. (strain Y412MC61)GEOSY00806UniProtKB/TrEMBL C9RU39Ribonuclease PH
BGeobacillus thermodenitrificans (strain NG80-2)GEOTN02531UniProtKB/Swiss-Prot RNPH_GEOTNRibonuclease PH
BOceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)OCEIH02100UniProtKB/Swiss-Prot RNPH_OCEIHribonuclease PH (tRNA nucleotidyltransferase) CDS_ID OB2106
BExiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)EXIS202107UniProtKB/Swiss-Prot RNPH_EXIS2Ribonuclease PH
BExiguobacterium sp. (strain ATCC BAA-1283 / AT1b)EXISA02614UniProtKB/TrEMBL C4L4I6Ribonuclease PH
BListeria innocua serovar 6a (strain CLIP 11262)LISIN01197UniProtKB/Swiss-Prot RNPH_LISINRibonuclease PH
BListeria monocytogenes serotype 1/2a (strain 08-5923)LISM201257UniProtKB/TrEMBL D2P483ribonuclease PH pmp logo
BListeria monocytogenes serotype 4a (strain HCC23)LISMH01390UniProtKB/Swiss-Prot RNPH_LISMHRibonuclease PH
BListeria monocytogenes serotype 4a (strain L99)LISML01220UniProtKB/TrEMBL E1UFM0Ribonuclease PH pmp logo
BListeria monocytogenes serotype 4b (strain CLIP80459)LISMC01219UniProtKB/Swiss-Prot RNPH_LISMCPutative ribonuclease PH
BListeria monocytogenes serotype 4b (strain F2365)LISMF01232UniProtKB/Swiss-Prot RNPH_LISMFribonuclease PH identified by similarity to SP:P28619; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BListeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)LISMO01233UniProtKB/Swiss-Prot RNPH_LISMORibonuclease PH
BListeria seeligeri serovar 1/2b (strain ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954)LISSS01120UniProtKB/TrEMBL D3UMD8ribonuclease PH
BListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)LISW601193UniProtKB/Swiss-Prot RNPH_LISW6Rph protein
BBrevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599)BREBN01787UniProtKB/Swiss-Prot RNPH_BREBNRibonuclease PH
BGeobacillus sp. (strain Y412MC10)GEOS401467UniProtKB/TrEMBL D3EKK7ribonuclease PH KEGG: pjd:Pjdr2_4458 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPaenibacillus mucilaginosus (strain KNP414)PAEMK06336UniProtKB/TrEMBL F8FNU7Rph Ribonuclease PH
BPaenibacillus polymyxa (strain E681)PAEP603621UniProtKB/TrEMBL E0RA52Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) COGMatches:COG0689; PfamMatches:PF01138, PF03725; PrositeMatches:PS01277; go_process: RNA processing (GO:0006396)
BPaenibacillus polymyxa (strain SC2)PAEPS04180UniProtKB/TrEMBL E3E5V6Ribonuclease PH
BPaenibacillus sp. (strain JDR-2)PAESJ04396UniProtKB/TrEMBL C6D899Ribonuclease PH pmp logo
BPaenibacillus terrae (strain HPL-003)PAETH00116UniProtKB/TrEMBL G7VUA5ribonuclease ph:ham1 COG0689 RNase PH
BAlkaliphilus metalliredigens (strain QYMF)ALKMQ00873UniProtKB/TrEMBL A6TLV8Ribonuclease PH pmp logo
BAlkaliphilus oremlandii (strain OhILAs)ALKOO00546UniProtKB/TrEMBL A8MLK5Ribonuclease PH pmp logo
BClostridium botulinum (strain Eklund 17B / Type B)CLOBB00386UniProtKB/Swiss-Prot RNPH_CLOBBRibonuclease PH
BClostridium botulinum (strain Alaska E43 / Type E3)CLOBA00370UniProtKB/Swiss-Prot RNPH_CLOBARibonuclease PH
BClostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)CLOCE01293UniProtKB/Swiss-Prot RNPH_CLOCEribonuclease PH TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; KEGG: cth:Cthe_0188 ribonuclease PH
BClostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)CLOK503301UniProtKB/Swiss-Prot RNPH_CLOK5RpH
BClostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC)CLOLD03569UniProtKB/TrEMBL D8GTB3ribonuclease PH
BClostridium perfringens (strain 13 / Type A)CLOPE02254UniProtKB/Swiss-Prot RNPH_CLOPERibonuclease PH
BClostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A)CLOP102449UniProtKB/Swiss-Prot RNPH_CLOP1ribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BClostridium perfringens (strain SM101 / Type A)CLOPS02154UniProtKB/Swiss-Prot RNPH_CLOPSribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BClostridium thermocellum (strain ATCC 27405 / DSM 1237)CLOTH00183UniProtKB/TrEMBL A3DBV0Ribonuclease PH pmp logo
BClostridium thermocellum (strain DSM 1313 / LMG 6656 / LQ8)CLOTL01962UniProtKB/TrEMBL E6UMC9ribonuclease PH PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; manually curated; KEGG: ate:Athe_0837 ribonuclease PH; TIGRFAM: ribonuclease PH
BSulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL)SULAD00667UniProtKB/TrEMBL G8U128RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR002381:IPR001247:IPR015847; KEGG: dno:DNO_0664 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type
BSulfobacillus acidophilus (strain TPY)SULAT01460UniProtKB/TrEMBL F8I561ribonuclease PH
BSymbiobacterium thermophilum (strain T / IAM 14863)SYMTH00340UniProtKB/Swiss-Prot RNPH_SYMTHRibonuclease PH
BAcetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655)ACEWD00292UniProtKB/TrEMBL H6LGH4ribonuclease PH
BEubacterium limosum (strain KIST612)EUBLK00931UniProtKB/TrEMBL E3GJP9ribonuclease PH
BHeliobacterium modesticaldum (strain ATCC 51547 / Ice1)HELMI00288UniProtKB/TrEMBL B0TFI3Ribonuclease ph pmp logo
BDesulforudis audaxviator (strain MP104C)DESAP01425UniProtKB/Swiss-Prot RNPH_DESAPRibonuclease PH
BDesulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1)DESDL02878UniProtKB/TrEMBL L0F9M8RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2
BDesulfitobacterium hafniense (strain DCB-2 / DSM 10664)DESHD04292UniProtKB/TrEMBL B8FVJ2Ribonuclease PH pmp logo
BDesulfitobacterium hafniense (strain Y51)DESHY03187UniProtKB/TrEMBL Q24SI1hypothetical protein similarity to COG0689 RNase PH(Evalue: 1E-82) pmp logo
BDesulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4)DESAJ04046UniProtKB/TrEMBL I4DBM8ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDesulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644)DESAS03324UniProtKB/TrEMBL C8VW47Ribonuclease PH
BDesulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17)DESK700348UniProtKB/TrEMBL F6CP62Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: pth:PTH_0791 ribonuclease PH
BDesulfotomaculum reducens (strain MI-1)DESRM02580UniProtKB/Swiss-Prot RNPH_DESRMRibonuclease PH
BDesulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL)DESRL00882UniProtKB/TrEMBL F6DJZ4ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: drm:Dred_2684 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)PELTS00782UniProtKB/TrEMBL A5D466RNase PH pmp logo
BSyntrophobotulus glycolicus (strain DSM 8271 / FlGlyR)SYNGF02417UniProtKB/TrEMBL F0SWL1RNAse PH COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR002381: IPR001247: IPR015847; KEGG: dsy:DSY3222 hypothetical protein; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BSyntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)SYNWW00420UniProtKB/Swiss-Prot RNPH_SYNWWTRNA nucleotidyltransferase
BSyntrophothermus lipocalidus (strain DSM 12680 / TGB-C1)SYNLT01987UniProtKB/TrEMBL D7CIR9Ribonuclease PH
BHalothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)HALOH01508UniProtKB/TrEMBL B8CYB9Ribonuclease PH pmp logo
BNatranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)NATTJ01878UniProtKB/TrEMBL B2A6I8RNAse PH pmp logo
BThermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)THETN00557UniProtKB/Swiss-Prot RNPH_THETNRibonuclease PH
BCarboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)CARHZ00312UniProtKB/Swiss-Prot RNPH_CARHZribonuclease PH identified by similarity to SP:P28619; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BMoorella thermoacetica (strain ATCC 39073)MOOTA00502UniProtKB/Swiss-Prot RNPH_MOOTAribonuclease PH
BThermoanaerobacter italicus (strain DSM 9252 / Ab9)THEIA00561UniProtKB/TrEMBL D3T7G5Ribonuclease PH
BThermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3)THEM300619UniProtKB/TrEMBL D7ATG1Ribonuclease PH
BThermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)THEP301602UniProtKB/Swiss-Prot RNPH_THEP3Ribonuclease PH
BThermoanaerobacter sp. (strain X513)THESX00559UniProtKB/TrEMBL E1SY64ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: tpd:Teth39_1683 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 pmp logo
BThermoanaerobacter sp. (strain X514)THEPX00521UniProtKB/Swiss-Prot RNPH_THEPXRibonuclease PH
BCaldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)CALBD00777UniProtKB/Swiss-Prot RNPH_CALBDribonuclease PH KEGG: csc:Csac_0985 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCaldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108)CALH101772UniProtKB/TrEMBL E4QDE0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ate:Athe_0837 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCaldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47)CALOO00701UniProtKB/TrEMBL D9TJA4ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: ate:Athe_0837 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCaldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL)CALOW00634UniProtKB/TrEMBL E4Q593Ribonuclease PH
BCaldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903)CALS800901UniProtKB/Swiss-Prot RNPH_CALS8Ribonuclease PH
BThermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)THESW02503UniProtKB/TrEMBL I3VYF2Ribonuclease PH TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: txy:Thexy_0742 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2
BThermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P)THEOJ01682UniProtKB/TrEMBL D9RYU3RNAse PH COGs: COG0689 RNase PH; InterPro IPR002381:IPR001247:IPR015847:IPR018336; KEGG: tte:TTE0618 RNase PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BVeillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3)VEIPT00430UniProtKB/TrEMBL D1BL62ribonuclease PH TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; KEGG: azo:azo3963 ribonuclease PH
BIlyobacter polytropus (strain DSM 2926 / CuHBu1)ILYPC01090UniProtKB/TrEMBL E3H7J4ribonuclease PH COGs: COG0689 RNase PH; InterProIPR018336:IPR002381:IPR020568:IPR015847:IPR 001247; KEGG: fnu:FN1851 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: C3WCU6 Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BLeptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249)LEPBD01320UniProtKB/TrEMBL C7NAS8Ribonuclease PH
BSebaldella termitidis (strain ATCC 33386 / NCTC 11300)SEBTE02266UniProtKB/TrEMBL D1AL37ribonuclease PH KEGG: hap:HAPS_1298 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BStreptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901)STRM900565UniProtKB/TrEMBL D1AXP7ribonuclease PH KEGG: hap:HAPS_1298 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BGemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505)GEMAT01568UniProtKB/TrEMBL C1A8Q3ribonuclease PH protein synonym: RNase PH protein synonym: tRNA nucleotidyltransferase
BThermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)THEYD01330UniProtKB/Swiss-Prot RNPH_THEYDRibonuclease PH
BPlanctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)PLAL202715UniProtKB/TrEMBL D5SR75
BRhodopirellula baltica (strain SH1)RHOBA06507UniProtKB/Swiss-Prot RNPH_RHOBAribonuclease PH PMID: 1624460 best DB hits: BLAST: swissprot:P28619; RNPH_BACSU RIBONUCLEASE PH (RNASE PH) (TRNA; E=2e-60 pir:A44914; tRNA nucleotidyltransferase (EC 2.7.7.56) - Bacillus; E=4e-60 pir:D82350; ribonuclease PH VC0210 [imported] - Vibrio cholerae; E=7e-60 COG: BS_rph; COG0689 RNase PH; E=2e-61 PA4740; COG1185 Polyribonucleotide nucleotidyltransferase; E=0.001 PFAM: PF01138; 3' exoribonuclease family; E=4.3e-59
BBrevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81)BRESC00210UniProtKB/TrEMBL D9QJ01Ribonuclease PH
BCaulobacter crescentus (strain ATCC 19089 / CB15)CAUCR00151UniProtKB/Swiss-Prot RNPH_CAUCRRibonuclease PH
BCaulobacter crescentus (strain NA1000 / CB15N)CAUCN00151UniProtKB/Swiss-Prot RNPH_CAUCNRibonuclease PH
BCaulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059)CAUST03882UniProtKB/TrEMBL D5VPJ6Ribonuclease PH
BCaulobacter sp. (strain K31)CAUSK00166UniProtKB/Swiss-Prot RNPH_CAUSKRibonuclease PH
BPhenylobacterium zucineum (strain HLK1)PHEZH03456UniProtKB/Swiss-Prot RNPH_PHEZHRibonuclease PH
BMagnetococcus sp. (strain MC-1)MAGSM00050UniProtKB/TrEMBL A0L3N7ribonuclease PH KEGG: bpm:BURPS1710b_3051 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease pmp logo
BParvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087)PARBH00735UniProtKB/TrEMBL E0TEN0ribonuclease PH pmp logo
BBeijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII900766UniProtKB/Swiss-Prot RNPH_BEII9Ribonuclease PH
BMethylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)METSB02102UniProtKB/Swiss-Prot RNPH_METSBRibonuclease PH
BBradyrhizobium japonicum (strain USDA 110)BRAJA00672UniProtKB/Swiss-Prot Q89WK4Ribonuclease PH
BBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB00176UniProtKB/Swiss-Prot RNPH_BRASBRNase PH
BBradyrhizobium sp. (strain ORS278)BRASO00166UniProtKB/Swiss-Prot RNPH_BRASORNase PH
BNitrobacter hamburgensis (strain X14 / DSM 10229)NITHX00148UniProtKB/Swiss-Prot RNPH_NITHXribonuclease PH
BNitrobacter winogradskyi (strain Nb-255 / ATCC 25391)NITWN00190UniProtKB/Swiss-Prot RNPH_NITWNRNAse PH
BOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)OLICO00407UniProtKB/Swiss-Prot RNPH_OLICORibonuclease PH
BOligotropha carboxidovorans (strain OM4)OLICM00116UniProtKB/TrEMBL F8BPU1ribonuclease PH pmp logo
BRhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)RHOPA00330UniProtKB/Swiss-Prot RNPH_RHOPARibonuclease PH
BRhodopseudomonas palustris (strain BisA53)RHOP500350UniProtKB/TrEMBL Q07US2ribonuclease PH KEGG: rpb:RPB_0425 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease pmp logo
BRhodopseudomonas palustris (strain BisB18)RHOPB00321UniProtKB/Swiss-Prot RNPH_RHOPBRNAse PH
BRhodopseudomonas palustris (strain BisB5)RHOPS00390UniProtKB/Swiss-Prot RNPH_RHOPSribonuclease PH
BRhodopseudomonas palustris (strain HaA2)RHOP200424UniProtKB/Swiss-Prot RNPH_RHOP2RNAse PH
BRhodopseudomonas palustris (strain TIE-1)RHOPT00330UniProtKB/Swiss-Prot RNPH_RHOPTRibonuclease PH
BBrucella abortus (strain 2308)BRUA200170UniProtKB/Swiss-Prot RNPH_BRUA23' exoribonuclease:Ribonuclease PH
BBrucella abortus (strain S19)BRUA100154UniProtKB/Swiss-Prot RNPH_BRUA1Ribonuclease PH
BBrucella abortus biovar 1 (strain 9-941)BRUAB00157UniProtKB/Swiss-Prot RNPH_BRUABRph, ribonuclease PH similar to BR0173, ribonuclease PH
BBrucella canis (strain ATCC 23365 / NCTC 10854)BRUC200169UniProtKB/Swiss-Prot RNPH_BRUC2Ribonuclease PH
BBrucella melitensis (strain M5-90)BRUM500181UniProtKB/TrEMBL F2GQD2ribonuclease PH pmp logo
BBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)BRUME01763UniProtKB/Swiss-Prot RNPH_BRUMERibonuclease PH pmp logo
BBrucella melitensis biotype 2 (strain ATCC 23457)BRUMB00160UniProtKB/Swiss-Prot RNPH_BRUMBRibonuclease PH
BBrucella microti (strain CCM 4915)BRUMC00168UniProtKB/TrEMBL C7LFM9Ribonuclease PH pmp logo
BBrucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO200152UniProtKB/Swiss-Prot RNPH_BRUO2Ribonuclease PH
BBrucella suis biovar 1 (strain 1330)BRUSU00182UniProtKB/Swiss-Prot RNPH_BRUSUribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BBrucella suis (strain ATCC 23445 / NCTC 10510)BRUSI00162UniProtKB/Swiss-Prot RNPH_BRUSIribonuclease PH GO_function: tRNA-specific ribonuclease activity [GO ID 0004549]; GO_process: tRNA processing [GO ID 0008033]
BOchrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)OCHA400181UniProtKB/Swiss-Prot RNPH_OCHA4Ribonuclease PH
BHyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415)HYPDA03289UniProtKB/TrEMBL D8JXJ9Ribonuclease PH
BPelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2)PELHB03300UniProtKB/TrEMBL G4R7U4ribonuclease PH
BRhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)RHOVT00594UniProtKB/TrEMBL E3HZE5ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: rpb:RPB_0425 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BMethylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1)METEA00296UniProtKB/TrEMBL C5AS34Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512252, 1512253, 1885537, 1925027, 6207018, 8501045, 88263018, 93015723; Product type e : enzyme pmp logo
BMethylobacterium extorquens (strain CM4 / NCIMB 13688)METC400397UniProtKB/Swiss-Prot RNPH_METC4ribonuclease PH KEGG: mex:Mext_0401 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BMethylobacterium extorquens (strain DSM 5838 / DM4)METED00439UniProtKB/TrEMBL C7C9G1Ribonuclease PH
BMethylobacterium extorquens (strain PA1)METEP00390UniProtKB/Swiss-Prot RNPH_METEPRibonuclease PH
BMethylobacterium nodulans (strain ORS2060 / LMG 21967)METNO04468UniProtKB/Swiss-Prot RNPH_METNORibonuclease PH
BMethylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB00442UniProtKB/Swiss-Prot RNPH_METPBRibonuclease PH
BMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)METRJ02885UniProtKB/Swiss-Prot RNPH_METRJRibonuclease PH
BMethylobacterium sp. (strain 4-46)METS403977UniProtKB/Swiss-Prot RNPH_METS4Ribonuclease PH
BChelativorans sp. (strain BNC1)CHESB03976UniProtKB/Swiss-Prot RNPH_CHESBRNAse PH TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; KEGG: bmb:BruAb1_0169 Rph, ribonuclease PH
BMesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271)MESCW00762UniProtKB/TrEMBL E8TFQ7
BRhizobium loti (strain MAFF303099)RHILO03549UniProtKB/Swiss-Prot RNPH_RHILOribonuclease PH
BAgrobacterium sp. (strain H13-3)AGRSH00307UniProtKB/TrEMBL F0L547ribonuclease PH RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; RNase PH
BAgrobacterium tumefaciens (strain C58 / ATCC 33970)AGRT500314UniProtKB/Swiss-Prot RNPH_AGRT5Ribonuclease PH
BAgrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK00458UniProtKB/Swiss-Prot RNPH_AGRRKRibonuclease PH
BAgrobacterium vitis (strain S4 / ATCC BAA-846)AGRVS00307UniProtKB/Swiss-Prot RNPH_AGRVSRibonuclease PH
BLiberibacter asiaticus (strain psy62)LIBAP00569UniProtKB/TrEMBL C6XFF0Ribonuclease PH
BRhizobium etli (strain CFN 42 / ATCC 51251)RHIEC00348UniProtKB/Swiss-Prot RNPH_RHIECribonuclease PH protein similar to rph (SMc01144) [Sinorhizobium meliloti] and rph (Atu0327) [Agrobacterium tumefaciens str. C58]; Similar to entrez-protein:Q92SK2; Putative location:bacterial cytoplasm Psort-Score: 0.4450; GO_function: GO:0016740 - transferase activity; GO_function: GO:0016779 - nucleotidyltransferase activity; GO_function: GO:0003723 - RNA binding; GO_function: GO:0000175 - 3`-5` exoribonuclease activity; GO_function: GO:0000049 - tRNA binding; GO_function: GO:0004549 - tRNA-specific ribonuclease activity; GO_function: GO:0009022 - tRNA nucleotidyltransferase activity; GO_process: GO:0006396 - RNA processing; GO_process: GO:0008033 - tRNA processing
BRhizobium etli (strain CIAT 652)RHIE600393UniProtKB/Swiss-Prot RNPH_RHIE6Ribonuclease PH protein
BRhizobium leguminosarum bv. trifolii (strain WSM1325)RHILS00006UniProtKB/TrEMBL C6AY94Ribonuclease PH pmp logo
BRhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW00006UniProtKB/Swiss-Prot RNPH_RHILWRibonuclease PH
BRhizobium leguminosarum bv. viciae (strain 3841)RHIL300382UniProtKB/Swiss-Prot RNPH_RHIL3putative ribonuclease similarity:fasta; with=UniProt:RNPH_CAUCR (EMBL:AE005689); Caulobacter crescentus.; rph; Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA nucleotidyltransferase).; length=EC 2.7.7.56; id 64.017; 239 aa overlap; query 1-239; subject 1-238 similarity:fasta; with=UniProt:RNPH_AGRT5 (EMBL:AE007971); Agrobacterium tumefaciens (strain C58/ATCC 33970).; rph; Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA nucleotidyltransferase).; length=EC 2.7.7.56; id 87.764; 237 aa overlap; query 1-237; subject 1-237
BRhizobium sp. (strain NGR234)RHISN00010UniProtKB/Swiss-Prot RNPH_RHISNRibonuclease PH
BRhizobium meliloti (strain 1021)RHIME00371UniProtKB/Swiss-Prot RNPH_RHIMEProbable ribonuclease PH protein
BSinorhizobium meliloti (strain AK83)SINMK00009UniProtKB/TrEMBL F6DVN8Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: smd:Smed_0010 ribonuclease PH pmp logo
BSinorhizobium medicae (strain WSM419)SINMW00010UniProtKB/Swiss-Prot RNPH_SINMWRibonuclease PH
BParvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)PARL103498UniProtKB/Swiss-Prot RNPH_PARL1Ribonuclease PH
BAzorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)AZOC504278UniProtKB/Swiss-Prot RNPH_AZOC5Ribonuclease PH
BStarkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113)STAND03763UniProtKB/TrEMBL D6ZYY9ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: xau:Xaut_2535 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BXanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)XANP202463UniProtKB/Swiss-Prot RNPH_XANP2Ribonuclease PH
BHirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418)HIRBI03079UniProtKB/TrEMBL C6XIH4Ribonuclease PH
BHyphomonas neptunium (strain ATCC 15444)HYPNA03248UniProtKB/TrEMBL Q0BX05Ribonuclease PH pmp logo
BMaricaulis maris (strain MCS10)MARMM02988UniProtKB/Swiss-Prot RNPH_MARMMRibonuclease PH
BDinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)DINSH03426UniProtKB/Swiss-Prot RNPH_DINSHRibonuclease PH
BJannaschia sp. (strain CCS1)JANSC00206UniProtKB/TrEMBL Q28VY9RNAse PH pmp logo
BKetogulonicigenium vulgare (strain Y25)KETVY02619UniProtKB/TrEMBL E3F136ribonuclease PH
BParacoccus denitrificans (strain Pd 1222)PARDP00010UniProtKB/TrEMBL A1AXY3ribonuclease PH KEGG: rsp:RSP_1221 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease pmp logo
BPseudovibrio sp. (strain FO-BEG1)PSEUV00368UniProtKB/TrEMBL G8PK60Ribonuclease PH
BRhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)RHOCB03440UniProtKB/TrEMBL D5ASX5Ribonuclease PH
BRhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)RHOS402848UniProtKB/TrEMBL Q3IYI2RNAse PH IMG reference gene:2512956265; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH pmp logo
BRhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS502540UniProtKB/Swiss-Prot RNPH_RHOS5Ribonuclease PH
BRhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)RHOS102845UniProtKB/Swiss-Prot RNPH_RHOS1ribonuclease PH KEGG: rsp:RSP_1221 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BRhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK02597UniProtKB/Swiss-Prot RNPH_RHOSKRibonuclease PH
BRoseobacter denitrificans (strain ATCC 33942 / OCh 114)ROSDO00399UniProtKB/Swiss-Prot RNPH_ROSDOribonuclease PH
BRuegeria sp. (strain TM1040)RUEST02861UniProtKB/Swiss-Prot RNPH_RUESTRNAse PH
BAcetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153)ACEP300062UniProtKB/TrEMBL C7JAU4Ribonuclease PH
BAcidiphilium cryptum (strain JF-5)ACICJ01628UniProtKB/TrEMBL A5FZ37Ribonuclease PH pmp logo
BGluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)GLUDA01332UniProtKB/TrEMBL A9HF53Putative Ribonuclease PH pmp logo
BGluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693)GLUXN01884ncbi logo BAK84362.1ribonuclease PH
BGluconobacter oxydans (strain 621H)GLUOX01231UniProtKB/TrEMBL Q5FRF3Ribonuclease PH pmp logo
BGranulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)GRABC00025UniProtKB/TrEMBL Q0BW79Ribonuclease PH pmp logo
BAzospirillum lipoferum (strain 4B)AZOL402729UniProtKB/TrEMBL G7Z6X9RNase PH Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512252, 1885537, 6207018; Product type e : enzyme
BMagnetospirillum magneticum (strain AMB-1 / ATCC 700264)MAGSA04450UniProtKB/TrEMBL Q2VYM3RNase PH pmp logo
BRhodospirillum centenum (strain ATCC 51521 / SW)RHOCS02875UniProtKB/TrEMBL B6IVK4Ribonuclease PH
BRhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)RHORT03630UniProtKB/Swiss-Prot RNPH_RHORTRNAse PH
BMidichloria mitochondrii (strain IricVA)MIDMI00359UniProtKB/TrEMBL F7XVJ7ribonuclease PH
BOrientia tsutsugamushi (strain Boryong)ORITB00211UniProtKB/TrEMBL A5CCD0TRNA nucleotidyltransferase
BOrientia tsutsugamushi (strain Ikeda)ORITI01099UniProtKB/TrEMBL B3CTZ6Ribonuclease PH
BRickettsia africae (strain ESF-5)RICAE00747UniProtKB/Swiss-Prot RNPH_RICAERibonuclease PH
BRickettsia akari (strain Hartford)RICAH00903UniProtKB/Swiss-Prot RNPH_RICAHRibonuclease PH
BRickettsia bellii (strain OSU 85-389)RICB800626UniProtKB/Swiss-Prot RNPH_RICB8Ribonuclease PH
BRickettsia bellii (strain RML369-C)RICBR00593UniProtKB/Swiss-Prot RNPH_RICBRRibonuclease PH
BRickettsia canadensis (strain McKiel)RICCK00312UniProtKB/Swiss-Prot RNPH_RICCKRibonuclease PH
BRickettsia conorii (strain ATCC VR-613 / Malish 7)RICCN00975UniProtKB/Swiss-Prot RNPH_RICCNRibonuclease PH
BRickettsia felis (strain ATCC VR-1525 / URRWXCal2)RICFE00382UniProtKB/Swiss-Prot RNPH_RICFERibonuclease PH
BRickettsia massiliae (strain Mtu5)RICM500694UniProtKB/TrEMBL A8F2B7Ribonuclease PH pmp logo
BRickettsia montanensis (strain OSU 85-930)RICMS00360UniProtKB/TrEMBL H8KC05ribonuclease PH COG0689 RNase PH
BRickettsia parkeri (strain Portsmouth)RICPT00956UniProtKB/TrEMBL H8KFI9ribonuclease PH COG0689 RNase PH pmp logo
BRickettsia peacockii (strain Rustic)RICPU00858UniProtKB/Swiss-Prot RNPH_RICPURibonuclease PH
BRickettsia philipii (strain 364D)RICP300971UniProtKB/TrEMBL H6PUP9ribonuclease PH COG0689 RNase PH pmp logo
BRickettsia prowazekii (strain Madrid E)RICPR00594UniProtKB/Swiss-Prot RNPH_RICPRRibonuclease PH
BRickettsia prowazekii (strain Rp22)RICPP00659UniProtKB/TrEMBL D5AXN3Ribonuclease PH pmp logo
BRickettsia rickettsii (strain Iowa)RICRO01001UniProtKB/Swiss-Prot RNPH_RICROribonuclease PH
BRickettsia rickettsii (strain Sheila Smith)RICRS00962UniProtKB/Swiss-Prot RNPH_RICRSRibonuclease PH
BRickettsia slovaca (strain 13-B)RICS100807UniProtKB/TrEMBL G8LBD7Ribonuclease PH pmp logo
BErythrobacter litoralis (strain HTCC2594)ERYLH01196UniProtKB/Swiss-Prot RNPH_ERYLHRNase PH COG0689 RNase PH
BNovosphingobium aromaticivorans (strain DSM 12444)NOVAD02040UniProtKB/TrEMBL Q2G6M3Ribonuclease PH pmp logo
BSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)SPHWW00562UniProtKB/Swiss-Prot RNPH_SPHWWRibonuclease PH
BSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256)SPHAL00249UniProtKB/Swiss-Prot RNPH_SPHALribonuclease PH
BZymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1)ZYMMA01139UniProtKB/TrEMBL F8DTT0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: zmn:Za10_1163 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BZymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)ZYMMO00014UniProtKB/Swiss-Prot RNPH_ZYMMOribonuclease PH TIGRFAM: ribonuclease PH; KEGG: swi:Swit_0567 RNAse PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPolymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)POLGS00023UniProtKB/TrEMBL F2IYE9Ribonuclease PH
BPelagibacter sp. (strain IMCC9063)PELSM00365UniProtKB/TrEMBL F2I073ribonuclease PH
BPuniceispirillum marinum (strain IMCC1322)PUNMI01620UniProtKB/TrEMBL D5BUB6
BAchromobacter xylosoxidans (strain A8)ACHXA03306UniProtKB/TrEMBL E3HHX4ribonuclease PH
BBordetella avium (strain 197N)BORA101920UniProtKB/TrEMBL Q2L0C2ribonuclease PH pmp logo
BBordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)BORBR02918UniProtKB/Swiss-Prot RNPH_BORBRRibonuclease PH
BBordetella bronchiseptica (strain MO149)BORBM02175UniProtKB/TrEMBL K0MVY1ribonuclease PH
BBordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)BORPA02956UniProtKB/Swiss-Prot RNPH_BORPARibonuclease PH
BBordetella pertussis (strain ATCC 9797 / DSM 5571 / NCTC 10739 / 18323)BORP101705UniProtKB/TrEMBL J7R560ribonuclease PH pmp logo
BBordetella pertussis (strain CS)BORPC01324UniProtKB/TrEMBL F4L9H2ribonuclease PH pmp logo
BBordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)BORPE01454UniProtKB/Swiss-Prot RNPH_BORPERibonuclease PH
BBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)BORPD02211UniProtKB/TrEMBL A9ILQ1Ribonuclease PH pmp logo
BPusillimonas sp. (strain T7-7)PUSST01191UniProtKB/TrEMBL F4GTF8ribonuclease PH
BTaylorella equigenitalis (strain MCE9)TAYEM00073UniProtKB/TrEMBL E8UD48Ribonuclease PH
BBurkholderia ambifaria (strain ATCC BAA-244 / AMMD)BURCM00852UniProtKB/Swiss-Prot RNPH_BURCMribonuclease PH KEGG: bpm:BURPS1710b_3051 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BBurkholderia ambifaria (strain MC40-6)BURA400855UniProtKB/Swiss-Prot RNPH_BURA4Ribonuclease PH
BBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)BURCJ02901UniProtKB/Swiss-Prot RNPH_BURCJribonuclease PH
BBurkholderia cenocepacia (strain AU 1054)BURCA00512UniProtKB/Swiss-Prot RNPH_BURCARibonuclease PH
BBurkholderia cenocepacia (strain HI2424)BURCH00989UniProtKB/Swiss-Prot RNPH_BURCHribonuclease PH KEGG: bcn:Bcen_0518 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BBurkholderia cenocepacia (strain MC0-3)BURCC00949UniProtKB/Swiss-Prot RNPH_BURCCRibonuclease PH
BBurkholderia multivorans (strain ATCC 17616 / 249)BURM102365UniProtKB/Swiss-Prot RNPH_BURM1Ribonuclease PH
BBurkholderia sp. (strain 383)BURS300918UniProtKB/Swiss-Prot RNPH_BURS3RNAse PH
BBurkholderia vietnamiensis (strain G4 / LMG 22486)BURVG00883UniProtKB/Swiss-Prot RNPH_BURVGRibonuclease PH
BBurkholderia gladioli (strain BSR3)BURGS00884UniProtKB/TrEMBL F2LAU6Ribonuclease PH
BBurkholderia glumae (strain BGR1)BURGB00797UniProtKB/TrEMBL C5ACI1Ribonuclease PH
BBurkholderia mallei (strain ATCC 23344)BURMA01719UniProtKB/Swiss-Prot RNPH_BURMARibonuclease PH
BBurkholderia mallei (strain NCTC 10229)BURM902488UniProtKB/Swiss-Prot RNPH_BURM9Ribonuclease PH
BBurkholderia mallei (strain NCTC 10247)BURM701843UniProtKB/Swiss-Prot RNPH_BURM7Ribonuclease PH
BBurkholderia mallei (strain SAVP1)BURMS00762UniProtKB/TrEMBL A1V1Q3Ribonuclease PH pmp logo
BBurkholderia phymatum (strain DSM 17167 / STM815)BURP800659UniProtKB/Swiss-Prot RNPH_BURP8Ribonuclease PH
BBurkholderia phytofirmans (strain DSM 17436 / PsJN)BURPP03003UniProtKB/Swiss-Prot RNPH_BURPPRibonuclease PH
BBurkholderia pseudomallei (strain 1106a)BURP002958UniProtKB/Swiss-Prot RNPH_BURP0Ribonuclease PH
BBurkholderia pseudomallei (strain 668)BURP602907UniProtKB/Swiss-Prot RNPH_BURP6Ribonuclease PH
BBurkholderia pseudomallei (strain K96243)BURPS02578UniProtKB/Swiss-Prot RNPH_BURPSRibonuclease PH
BBurkholderia sp. (strain CCGE1003)BURSG02623UniProtKB/TrEMBL E1T6X1Ribonuclease PH
BBurkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)BURTA01536UniProtKB/Swiss-Prot RNPH_BURTAribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BBurkholderia xenovorans (strain LB400)BURXL03415UniProtKB/Swiss-Prot RNPH_BURXLRibonuclease PH
BRalstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)RALME00843UniProtKB/Swiss-Prot RNPH_RALMEribonuclease PH
BCupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)CUPNH00942UniProtKB/Swiss-Prot RNPH_CUPNHRibonuclease PH
BCupriavidus pinatubonensis (strain JMP 134 / LMG 1197)CUPPJ02450UniProtKB/TrEMBL Q46YE4Ribonuclease PH pmp logo
BCupriavidus taiwanensis (strain R1 / LMG 19424)CUPTR00921UniProtKB/Swiss-Prot RNPH_CUPTRRNase PH
BPolynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1)POLSQ01071UniProtKB/TrEMBL A4SXT2Ribonuclease PH pmp logo
BRalstonia pickettii (strain 12D)RALP101915UniProtKB/TrEMBL C6BJZ5Ribonuclease PH
BRalstonia pickettii (strain 12J)RALPJ02186UniProtKB/Swiss-Prot RNPH_RALPJRibonuclease PH
BRalstonia solanacearum (strain GMI1000)RALSO02125UniProtKB/Swiss-Prot RNPH_RALSORibonuclease PH
BRalstonia solanacearum (strain Po82)RALS801275UniProtKB/TrEMBL F6G013ribonuclease ph (rnase ph) (trnanucleotidyltransferase) protein
BAcidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011)ACIAP03446UniProtKB/TrEMBL F0QBN2
BAcidovorax citrulli (strain AAC00-1)ACIAC03413UniProtKB/TrEMBL A1TT42ribonuclease PH KEGG: pol:Bpro_1339 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease pmp logo
BAcidovorax ebreus (strain TPSY)ACIET00844UniProtKB/TrEMBL B9MEK0Ribonuclease PH
BAcidovorax sp. (strain JS42)ACISJ00888UniProtKB/TrEMBL A1W4I8ribonuclease PH KEGG: pol:Bpro_1339 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease pmp logo
BPolaromonas sp. (strain JS666 / ATCC BAA-500)POLSJ01315UniProtKB/TrEMBL Q12DV3ribonuclease PH pmp logo
BRamlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)RAMTT03344UniProtKB/TrEMBL F5XYN7tRNA nucleotidyltransferase
BAlbidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118)ALBFT01586UniProtKB/TrEMBL Q21XZ4RNAse PH pmp logo
BVariovorax paradoxus (strain EPS)VARPE04878UniProtKB/TrEMBL E6V238ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: vap:Vapar_4325 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BVariovorax paradoxus (strain S110)VARPS04267UniProtKB/TrEMBL C5CYX5ribonuclease PH KEGG: dia:Dtpsy_0858 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BCollimonas fungivorans (strain Ter331)COLFT02439UniProtKB/TrEMBL G0AH35Ribonuclease PH
BHerminiimonas arsenicoxydansHERAR02014UniProtKB/TrEMBL A4G6X6RNase PH pmp logo
BJanthinobacterium sp. (strain Marseille)JANMA01331UniProtKB/TrEMBL A6SXM5Ribonuclease PH pmp logo
BLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)LEPCP00702UniProtKB/TrEMBL B1Y0J9Ribonuclease PH pmp logo
BMethylibium petroleiphilum (strain PM1)METPP02657UniProtKB/TrEMBL A2SJC0TRNA nucleotidyltransferase pmp logo
BThiobacillus denitrificans (strain ATCC 25259)THIDA00476UniProtKB/TrEMBL Q3SLI0ribonuclease PH pmp logo
BMethylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875)METFK00043UniProtKB/Swiss-Prot RNPH_METFKribonuclease PH
BMethylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540)METML00172UniProtKB/TrEMBL C6WYV9Ribonuclease PH
BMethylovorus glucosetrophus (strain SIP3-4)METGS00047UniProtKB/TrEMBL C6X7Q4ribonuclease PH KEGG: mfa:Mfla_0043 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BMethylovorus sp. (strain MP688)METS600046UniProtKB/TrEMBL E4QNB8ribonuclease PH
BChromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)CHRVO03841UniProtKB/Swiss-Prot RNPH_CHRVORibonuclease PH
BLaribacter hongkongensis (strain HLHK9)LARHH02597UniProtKB/Swiss-Prot RNPH_LARHHRnpH
BNeisseria gonorrhoeae (strain ATCC 700825 / FA 1090)NEIG100859UniProtKB/Swiss-Prot RNPH_NEIG1putative ribonuclease PH Best Blastp Hit: pir||A81866 tRNA nucleotidyltransferase (EC 2.7.7.56) - Neisseria meningitidis (group A strain Z2491) >gi|7380343|emb|CAB84930.1| (AL162756) ribonuclease PH [Neisseria meningitidis]; COG0689 RNase PH
BNeisseria gonorrhoeae (strain NCCP11945)NEIG200817UniProtKB/Swiss-Prot RNPH_NEIG2Putative ribonuclease PH
BNeisseria meningitidis (strain alpha14)NEIML01269UniProtKB/TrEMBL C6S7V9Ribonuclease PH
BNeisseria meningitidis serogroup A / serotype 4A (strain Z2491)NEIMA01481UniProtKB/Swiss-Prot RNPH_NEIMARibonuclease PH
BNeisseria meningitidis serogroup B (strain MC58)NEIMB01377UniProtKB/Swiss-Prot RNPH_NEIMBRibonuclease PH
BNeisseria meningitidis serogroup B / serotype 15 (strain H44/76)NEIMH00666UniProtKB/TrEMBL E6MU24ribonuclease PH pmp logo
BNeisseria meningitidis serogroup B (strain G2136)NEIMG01317UniProtKB/TrEMBL F0MDI9ribonuclease PH pmp logo
BNeisseria meningitidis serogroup B (strain M01-240149)NEIMM00621UniProtKB/TrEMBL F0MQQ0ribonuclease PH pmp logo
BNeisseria meningitidis serogroup B (strain NZ-05/33)NEIMN01408UniProtKB/TrEMBL F0N899ribonuclease PH pmp logo
BNeisseria meningitidis serogroup C (strain 053442)NEIM001328UniProtKB/Swiss-Prot RNPH_NEIM0ribonuclease PH Code: J; COG: COG0689
BNeisseria meningitidis serogroup C (strain 8013)NEIM800761UniProtKB/TrEMBL C9WYL3Ribonuclease PH
BNeisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18)NEIMF01285UniProtKB/Swiss-Prot RNPH_NEIMFRibonuclease PH
BNitrosomonas europaea (strain ATCC 19718 / NBRC 14298)NITEU00263UniProtKB/Swiss-Prot RNPH_NITEURibonuclease PH
BNitrosomonas eutropha (strain C91)NITEC00296UniProtKB/Swiss-Prot RNPH_NITECribonuclease PH KEGG: neu:NE0276 3' exoribonuclease family TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BNitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)NITMU00062UniProtKB/Swiss-Prot RNPH_NITMURNAse PH
BAromatoleum aromaticum (strain EbN1)AROAE01242UniProtKB/Swiss-Prot RNPH_AROAERibonuclease PH
BAzoarcus sp. (strain BH72)AZOSB03951UniProtKB/Swiss-Prot RNPH_AZOSBribonuclease PH Ribonuclease PH (EC 2.7.7.56) (tRNA nucleotidyltransferase). Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates. High confidence in function and specificity
BDechloromonas aromatica (strain RCB)DECAR03804UniProtKB/Swiss-Prot RNPH_DECARRNAse PH
BThauera sp. (strain MZ1T)THASP03789UniProtKB/TrEMBL C4K996Ribonuclease PH pmp logo
BAcidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455)ACIF202201UniProtKB/TrEMBL B7J6B0Ribonuclease PH
BAcidithiobacillus ferrooxidans (strain ATCC 53993)ACIF501881UniProtKB/TrEMBL B5ELL0Ribonuclease PH
BAeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)AERHH04063UniProtKB/TrEMBL A0KQU6ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966 pmp logo
BAeromonas salmonicida (strain A449)AERS400077UniProtKB/TrEMBL A4SHC8Ribonuclease PH pmp logo
BAeromonas veronii (strain B565)AERVB03837UniProtKB/TrEMBL F4DGA7RNase PH
BOceanimonas sp. (strain GK1)OCESG00624UniProtKB/TrEMBL H2FY60ribonuclease PH COG0689 RNase PH
BTolumonas auensis (strain DSM 9187 / TA4)TOLAT00187UniProtKB/Swiss-Prot RNPH_TOLATribonuclease PH KEGG: swd:Swoo_4568 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BAlteromonas macleodii (strain Black Sea 11)ALTMS03714UniProtKB/TrEMBL K0D3D9ribonuclease PH COG0689 RNase PH
BAlteromonas macleodii (strain DSM 17117 / Deep ecotype)ALTMD03992UniProtKB/Swiss-Prot RNPH_ALTMDRNase PH
BAlteromonas macleodii (strain English Channel 673)ALTME03839UniProtKB/TrEMBL K0CYF3ribonuclease PH COG0689 RNase PH
BMarinobacter adhaerens (strain HP15)MARAH00298UniProtKB/TrEMBL E4PL22ribonuclease PH
BMarinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8)MARAV00510UniProtKB/Swiss-Prot RNPH_MARAVribonuclease PH KEGG: sde:Sde_3683 tRNA nucleotidyltransferase TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BSaccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)SACD203664UniProtKB/Swiss-Prot RNPH_SACD2RNAse PH
BTeredinibacter turnerae (strain ATCC 39867 / T7901)TERTT00159UniProtKB/Swiss-Prot RNPH_TERTTRibonuclease PH
BColwellia psychrerythraea (strain 34H / ATCC BAA-681)COLP300095UniProtKB/Swiss-Prot RNPH_COLP3ribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BFerrimonas balearica (strain DSM 9799 / CCM 4581 / PAT)FERBD00127UniProtKB/TrEMBL E1SW41Ribonuclease PH
BIdiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)IDILO02396UniProtKB/Swiss-Prot RNPH_IDILORNase PH
BPseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)PSEA604238UniProtKB/Swiss-Prot RNPH_PSEA6Ribonuclease PH
BPseudoalteromonas haloplanktis (strain TAC 125)PSEHT02716UniProtKB/Swiss-Prot RNPH_PSEHTRNase PH (tRNA nucleotidyltransferase) Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1644789; Product type e : enzyme
BPseudoalteromonas sp. (strain SM9913)PSEU902775UniProtKB/TrEMBL E6RK93
BPsychromonas ingrahamii (strain 37)PSYIN03276UniProtKB/Swiss-Prot RNPH_PSYINribonuclease PH KEGG: eca:ECA0140 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BShewanella amazonensis (strain ATCC BAA-1098 / SB2B)SHEAM00318UniProtKB/Swiss-Prot RNPH_SHEAMtRNA nucleotidyltransferase KEGG: son:SO4256 ribonuclease PH
BShewanella baltica (strain OS155 / ATCC BAA-1091)SHEB500359UniProtKB/Swiss-Prot RNPH_SHEB5Ribonuclease PH
BShewanella baltica (strain OS185)SHEB800363UniProtKB/Swiss-Prot RNPH_SHEB8Ribonuclease PH
BShewanella baltica (strain OS195)SHEB900380UniProtKB/Swiss-Prot RNPH_SHEB9KEGG: shw:Sputw3181_0332 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 ribonuclease PH
BShewanella baltica (strain OS223)SHEB200380UniProtKB/Swiss-Prot RNPH_SHEB2Ribonuclease PH
BShewanella baltica (strain OS678)SHEB600384UniProtKB/TrEMBL E6T2M0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: shw:Sputw3181_0332 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 pmp logo
BShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)SHEDO00315UniProtKB/Swiss-Prot RNPH_SHEDORibonuclease PH
BShewanella frigidimarina (strain NCIMB 400)SHEFN03759UniProtKB/Swiss-Prot RNPH_SHEFNRibonuclease PH
BShewanella halifaxensis (strain HAW-EB4)SHEHH00420UniProtKB/Swiss-Prot RNPH_SHEHHRibonuclease PH
BShewanella loihica (strain ATCC BAA-1088 / PV-4)SHELP03476UniProtKB/Swiss-Prot RNPH_SHELPribonuclease PH KEGG: shm:Shewmr7_0352 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BShewanella oneidensis (strain MR-1)SHEON03985UniProtKB/Swiss-Prot RNPH_SHEONRibonuclease PH
BShewanella pealeana (strain ATCC 700345 / ANG-SQ1)SHEPA03764UniProtKB/Swiss-Prot RNPH_SHEPAKEGG: slo:Shew_3488 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 ribonuclease PH
BShewanella piezotolerans (strain WP3 / JCM 13877)SHEPW02080UniProtKB/Swiss-Prot RNPH_SHEPWRibonuclease PH
BShewanella putrefaciens (strain CN-32 / ATCC BAA-453)SHEPC00436UniProtKB/Swiss-Prot RNPH_SHEPCRibonuclease PH
BShewanella sediminis (strain HAW-EB3)SHESH00378UniProtKB/Swiss-Prot RNPH_SHESHKEGG: slo:Shew_3488 ribonuclease PH tRNA nucleotidyltransferase
BShewanella sp. (strain ANA-3)SHESA03731UniProtKB/Swiss-Prot RNPH_SHESAribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease KEGG: son:SO4256 ribonuclease PH
BShewanella sp. (strain MR-4)SHESM03580UniProtKB/Swiss-Prot RNPH_SHESMRibonuclease PH
BShewanella sp. (strain MR-7)SHESR00349UniProtKB/Swiss-Prot RNPH_SHESRRibonuclease PH
BShewanella sp. (strain W3-18-1)SHESW00328UniProtKB/Swiss-Prot RNPH_SHESWribonuclease PH KEGG: son:SO4256 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease
BShewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)SHEVD04055UniProtKB/TrEMBL D4ZDX6Ribonuclease PH
BShewanella woodyi (strain ATCC 51908 / MS32)SHEWM04502UniProtKB/Swiss-Prot RNPH_SHEWMRibonuclease PH
BDichelobacter nodosus (strain VCS1703A)DICNV00628UniProtKB/Swiss-Prot RNPH_DICNVRibonuclease PH
BNitrosococcus halophilus (strain Nc4)NITHN00691UniProtKB/TrEMBL D5BXG1ribonuclease PH KEGG: noc:Noc_2442 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)NITOC02318UniProtKB/Swiss-Prot RNPH_NITOCRNAse PH
BNitrosococcus watsoni (strain C-113)NITWC00645UniProtKB/TrEMBL D8KBN6ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: noc:Noc_2442 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BThiocystis violascens (strain ATCC 17096 / DSM 198 / 6111)THIV602995UniProtKB/TrEMBL I3YDY2RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BAlkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)ALKEH02424UniProtKB/Swiss-Prot RNPH_ALKEHRNAse PH KEGG: xcb:XC_0960 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease
BHalorhodospira halophila (strain DSM 244 / SL1)HALHL00952UniProtKB/Swiss-Prot RNPH_HALHLRibonuclease PH
BThioalkalivibrio sp. (strain HL-EbGR7)THISH02916UniProtKB/Swiss-Prot RNPH_THISHRibonuclease PH
BCitrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)CITK804951UniProtKB/Swiss-Prot RNPH_CITK8Ribonuclease PH
BCitrobacter rodentium (strain ICC168)CITRI03963UniProtKB/TrEMBL D2TIV8Ribonuclease PH
BCronobacter sakazakii (strain ATCC BAA-894)CROS803939UniProtKB/TrEMBL A7MQA8Putative uncharacterized protein pmp logo
BCronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032)CROTZ04148UniProtKB/TrEMBL C9Y3A6Ribonuclease PH
BDickeya dadantii (strain 3937)DICD304323UniProtKB/TrEMBL E0SLM4Ribonuclease PH
BDickeya dadantii (strain Ech586)DICD500144UniProtKB/TrEMBL D2C181ribonuclease PH KEGG: dze:Dd1591_3965 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BDickeya dadantii (strain Ech703)DICDC00152UniProtKB/TrEMBL C6C6Q2Ribonuclease PH
BDickeya zeae (strain Ech1591)DICZE03839UniProtKB/TrEMBL C6CP22Ribonuclease PH
BEdwardsiella ictaluri (strain 93-146)EDWI900046UniProtKB/Swiss-Prot RNPH_EDWI9Ribonuclease PH
BEdwardsiella tarda (strain EIB202)EDWTE00059UniProtKB/TrEMBL D0Z934Ribonuclease PH pmp logo
BEdwardsiella tarda (strain FL6-60)EDWTF00034UniProtKB/TrEMBL E0T4L2Ribonuclease PH pmp logo
BEnterobacter aerogenes (strain ATCC 13048 / DSM 30053 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006)ENTAK01266UniProtKB/TrEMBL G0E7Z8ribonuclease PH COG0689 RNase PH
BEnterobacter asburiae (strain LF7a)ENTAL00103UniProtKB/TrEMBL G2S806Ribonuclease PH TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: enc:ECL_00118 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2
BEnterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56)ENTCC00117UniProtKB/TrEMBL D5CAG7ribonuclease PH
BEnterobacter sp. (strain 638)ENT3800096UniProtKB/Swiss-Prot RNPH_ENT38Ribonuclease PH
BErwinia amylovora (strain CFBP1430)ERWAC00071UniProtKB/TrEMBL D4HU90ribonuclease PH Ribonuclease PH (tRNA nucleotidyltransferase)
BErwinia billingiae (strain Eb661)ERWBE00056UniProtKB/TrEMBL D8MKD1Ribonuclease PH silverDB:661Eb00071
BErwinia pyrifoliae (strain Ep1/96)ERWPE00072UniProtKB/TrEMBL D0FML4Ribonuclease PH (TRNA nucleotidyltransferase) silverDB:cEP00073
BErwinia sp. (strain Ejp617)ERWSE01211UniProtKB/TrEMBL E3DBQ1ribonuclease PH
BErwinia tasmaniensis (strain DSM 17950 / Et1/99)ERWT900061UniProtKB/Swiss-Prot RNPH_ERWT9Ribonuclease PH
BEscherichia coli (strain 55989 / EAEC)ECO5503950UniProtKB/TrEMBL B7L767Ribonuclease PH pmp logo
BEscherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1)ECOD100059UniProtKB/TrEMBL C9QUL8Ribonuclease PH pmp logo
BEscherichia coli (strain ATCC 55124 / KO11)ECOKO00077UniProtKB/TrEMBL E8YAB4ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: sbc:SbBS512_E4068 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 pmp logo
BEscherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W)ECOLW03942UniProtKB/TrEMBL E0J5C1ribonuclease PH pmp logo
BEscherichia coli (strain B / BL21)ECOBB03378ncbi logo CAQ33969.1Rph protein
BEscherichia coli (strain B / BL21-DE3)ECOBD00081UniProtKB/TrEMBL C6EDE8Ribonuclease PH pmp logo
BEscherichia coli (strain K12)ECOLI03522UniProtKB/Swiss-Prot P03842Ribonuclease PH pmp logo
BEscherichia coli (strain K12 / MC4100 / BW2952)ECOBW03286UniProtKB/Swiss-Prot RNPH_ECOBWRibonuclease PH
BEscherichia coli (strain SE11)ECOSE03906UniProtKB/Swiss-Prot RNPH_ECOSERibonuclease PH
BEscherichia coli (strain SMS-3-5 / SECEC)ECOSM03802UniProtKB/Swiss-Prot RNPH_ECOSMRibonuclease PH
BEscherichia coli (strain UM146)ECOUM03583UniProtKB/TrEMBL E1RUB6ribonuclease PH COG0689 RNase PH pmp logo
BEscherichia coli (strain UTI89 / UPEC)ECOUT04092UniProtKB/TrEMBL Q1R4U9Ribonuclease PH pmp logo
BEscherichia coli (strain B / REL606)ECOBR03386UniProtKB/TrEMBL C6UHF9Ribonuclease PH pmp logo
BEscherichia coli (strain ATCC 8739 / DSM 1576 / Crooks)ECOLC00063UniProtKB/Swiss-Prot RNPH_ECOLCRibonuclease PH
BEscherichia coli O103:H2 (strain 12009 / EHEC)ECO1004379UniProtKB/TrEMBL C8TZ74ribonuclease PH pmp logo
BEscherichia coli O111:H- (strain 11128 / EHEC)ECO1A04309UniProtKB/TrEMBL C8UJ30Ribonuclease PH pmp logo
BEscherichia coli O127:H6 (strain E2348/69 / EPEC)ECO2703828UniProtKB/Swiss-Prot RNPH_ECO27Ribonuclease PH
BEscherichia coli O139:H28 (strain E24377A / ETEC)ECO2403907UniProtKB/Swiss-Prot RNPH_ECO24Ribonuclease PH
BEscherichia coli O150:H5 (strain SE15)ECOS503465UniProtKB/TrEMBL D2NCP4ribonuclease PH pmp logo
BEscherichia coli O157:H7ECO5704367UniProtKB/Swiss-Prot RNPH_ECO57Ribonuclease PH pmp logo
BEscherichia coli O157:H7 (strain EC4115 / EHEC)ECO5E04310UniProtKB/Swiss-Prot RNPH_ECO5ERibonuclease PH
BEscherichia coli O157:H7 (strain TW14359 / EHEC)ECO5T04334UniProtKB/TrEMBL C6UXR9Ribonuclease PH pmp logo
BEscherichia coli O17:K52:H18 (strain UMN026 / ExPEC)ECOLU04037UniProtKB/TrEMBL B7NEU7Ribonuclease PH pmp logo
BEscherichia coli O18:K1:H7 (strain IHE3034 / ExPEC)ECOKI03916UniProtKB/TrEMBL D5D4E5ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966 pmp logo
BEscherichia coli O1:K1 / APECECOK103607UniProtKB/Swiss-Prot RNPH_ECOK1ribonuclease PH
BEscherichia coli O44:H18 (strain 042 / EAEC)ECO4403908UniProtKB/TrEMBL D3H293ribonuclease PH pmp logo
BEscherichia coli O45:K1 (strain S88 / ExPEC)ECO4503859UniProtKB/TrEMBL B7MFK4Ribonuclease PH pmp logo
BEscherichia coli O55:H7 (strain CB9615 / EPEC)ECOCB04151UniProtKB/TrEMBL D3QV68Ribonuclease PH pmp logo
BEscherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)ECOL604330UniProtKB/Swiss-Prot RNPH_ECOL6Ribonuclease PH
BEscherichia coli O6:K15:H31 (strain 536 / UPEC)ECOL503687UniProtKB/Swiss-Prot RNPH_ECOL5Ribonuclease PH
BEscherichia coli O78:H11 (strain H10407 / ETEC)ECOH103811UniProtKB/TrEMBL E3PN05ribonuclease PH pmp logo
BEscherichia coli O7:K1 (strain IAI39 / ExPEC)ECO7I03949UniProtKB/TrEMBL B7NQ05Ribonuclease PH pmp logo
BEscherichia coli O8 (strain IAI1)ECO8A03670UniProtKB/TrEMBL B7M4C8Ribonuclease PH pmp logo
BEscherichia coli O81 (strain ED1a)ECO8104098UniProtKB/TrEMBL B7N1U4Ribonuclease PH pmp logo
BEscherichia coli O9:H4 (strain HS)ECOHS03589UniProtKB/Swiss-Prot RNPH_ECOHSRibonuclease PH
BEscherichia coli OR:K5:H- (strain ABU 83972)ECOAB03886UniProtKB/TrEMBL E1PK30Ribonuclease PH pmp logo
BEscherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)ESCF303760UniProtKB/TrEMBL B7LVK5ribonuclease PH Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 1885537, 1512252, 1512253; Product type e : enzyme pmp logo
BKlebsiella pneumoniae (strain 342)KLEP300109UniProtKB/Swiss-Prot RNPH_KLEP3Ribonuclease PH
BKlebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)KLEP703926UniProtKB/Swiss-Prot RNPH_KLEP7Ribonuclease PH
BKlebsiella pneumoniae subsp. pneumoniae (strain HS11286)KLEPH05114UniProtKB/TrEMBL G8VTE7tRNA nucleotidyltransferase
BKlebsiella variicola (strain At-22)KLEVT00113UniProtKB/TrEMBL D3RC01Ribonuclease PH
BPantoea ananatis (strain AJ13355)PANAA03121UniProtKB/TrEMBL F2EXQ1ribonuclease Rph similar to Yersinia aldovae ATCC 35236, ribonuclease PH (NCBI: ZP_04621595.1) COG: translation, ribosomal structure and biogenesis subcellular localization as predicted by Psort 2.0: cytoplasmic
BPantoea ananatis (strain LMG 20103)PANAM03909UniProtKB/TrEMBL D4GE34Ribonuclease PH
BPantoea sp. (strain At-9b)PANSA03871UniProtKB/TrEMBL E6WAK5ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: spe:Spro_4847 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPantoea vagans (strain C9-1)PANVC03120UniProtKB/TrEMBL E1SIU1ribonuclease PH RNase PH
BPectobacterium carotovorum subsp. carotovorum (strain PC1)PECCP04057UniProtKB/Swiss-Prot RNPH_PECCPRibonuclease PH
BPectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)PECAS00136UniProtKB/Swiss-Prot RNPH_PECASribonuclease PH Similar to Escherichia coli ribonuclease PH Rph or b3643 SWALL:RNPH_ECOLI (SWALL:P03842) (238 aa) fasta scores: E(): 8.2e-78, 85.71% id in 238 aa
BPectobacterium wasabiae (strain WPP163)PECWW04212UniProtKB/TrEMBL D0KD71Ribonuclease PH
BPhotorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)PHOAA04293UniProtKB/TrEMBL C7BT31Ribonuclease ph
BPhotorhabdus luminescens subsp. laumondii (strain TT01)PHOLL04728UniProtKB/Swiss-Prot RNPH_PHOLLRibonuclease PH
BProteus mirabilis (strain HI4320)PROMH03117UniProtKB/Swiss-Prot RNPH_PROMHRibonuclease PH
BProvidencia stuartii (strain MRSN 2154)PROSM02076UniProtKB/TrEMBL I0DUI0ribonuclease PH COG0689 RNase PH
BRahnella sp. (strain Y9602)RAHSY04303UniProtKB/TrEMBL E8XNI3ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: spe:Spro_4847 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BSalmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419)SALBC03260UniProtKB/TrEMBL F8VDZ0RNase PH
BSalmonella dublin (strain CT_02021853)SALDC03730UniProtKB/Swiss-Prot RNPH_SALDCRibonuclease PH
BSalmonella agona (strain SL483)SALA403665UniProtKB/Swiss-Prot RNPH_SALA4Ribonuclease PH
BSalmonella choleraesuis (strain SC-B67)SALCH03611UniProtKB/Swiss-Prot RNPH_SALCHRNase PH IPR002381: Ribonuclease PH
BSalmonella pullorum (strain RKS5078 / SGSC2294)SALPS03599UniProtKB/TrEMBL G7SZT9RNase PH pmp logo
BSalmonella heidelberg (strain SL476)SALHS03776UniProtKB/Swiss-Prot RNPH_SALHSRibonuclease PH
BSalmonella paratyphi C (strain RKS4594)SALPC03659UniProtKB/TrEMBL C0Q1X5Ribonuclease PH
BSalmonella schwarzengrund (strain CVM19633)SALSV03644UniProtKB/Swiss-Prot RNPH_SALSVRibonuclease PH
BSalmonella enteritidis PT4 (strain P125109)SALEP03531UniProtKB/Swiss-Prot RNPH_SALEPRNase PH
BSalmonella gallinarum (strain 287/91 / NCTC 13346)SALG203551UniProtKB/Swiss-Prot RNPH_SALG2RNase PH
BSalmonella newport (strain SL254)SALNS03744UniProtKB/Swiss-Prot RNPH_SALNSRibonuclease PH
BSalmonella paratyphi A (strain AKU_12601)SALPK03489UniProtKB/Swiss-Prot RNPH_SALPKRNase PH
BSalmonella paratyphi A (strain ATCC 9150 / SARB42)SALPA03337UniProtKB/Swiss-Prot RNPH_SALPARNase PH similar to Salmonella typhi CT18 RNase PH
BSalmonella typhiSALTI03697UniProtKB/Swiss-Prot RNPH_SALTIRibonuclease PH pmp logo
BSalmonella typhimurium (strain 4/74)SALT403761UniProtKB/TrEMBL E8XGT3ribonuclease PH pmp logo
BSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)SALTY03605UniProtKB/Swiss-Prot RNPH_SALTYRibonuclease PH
BSalmonella typhimurium (strain SL1344)SALTS03677UniProtKB/TrEMBL E1WDG3Ribonuclease PH pmp logo
BSalmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)SALAR03736UniProtKB/Swiss-Prot RNPH_SALARPutative uncharacterized protein
BSerratia plymuthica (strain AS9)SERSA04870UniProtKB/TrEMBL G0BD25Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: spe:Spro_4847 ribonuclease PH
BSerratia proteamaculans (strain 568)SERP504817UniProtKB/Swiss-Prot RNPH_SERP5Ribonuclease PH
BShigella boydii serotype 18 (strain CDC 3083-94 / BS512)SHIB303164UniProtKB/Swiss-Prot RNPH_SHIB3Ribonuclease PH
BShigella boydii serotype 4 (strain Sb227)SHIBS03085UniProtKB/Swiss-Prot RNPH_SHIBSRNase PH Code: J; COG: COG0689
BShigella dysenteriae serotype 1 (strain Sd197)SHIDS03240UniProtKB/Swiss-Prot RNPH_SHIDSRNase PH Code: J; COG: COG0689
BShigella flexneriSHIFL03984UniProtKB/Swiss-Prot RNPH_SHIFLRNase PH Code: J; COG: COG0689 pmp logo
BShigella flexneri serotype 5b (strain 8401)SHIF803357UniProtKB/Swiss-Prot RNPH_SHIF8RNase PH Code: J; COG: COG0689
BShigella sonnei (strain Ss046)SHISS03164UniProtKB/Swiss-Prot RNPH_SHISSRNase PH Code: J; COG: COG0689
BShimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 / CDC 9005-74)SHIBC03770UniProtKB/TrEMBL I2BEJ0ribonuclease PH
BSodalis glossinidius (strain morsitans)SODGM02184UniProtKB/Swiss-Prot RNPH_SODGMribonuclease PH
BYersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)YERE800055UniProtKB/Swiss-Prot RNPH_YERE8Ribonuclease PH
BYersinia enterocolitica subsp. palearctica serotype O:9 / biotype 3 (strain 105.5R(r))YERE300055UniProtKB/TrEMBL F0L007
BYersinia pestisYERPE00040UniProtKB/Swiss-Prot RNPH_YERPERibonuclease PH pmp logo
BYersinia pestis (strain D106004)YERPD00038UniProtKB/TrEMBL D0JCB5ribonuclease PH pmp logo
BYersinia pestis (strain D182038)YERP100040UniProtKB/TrEMBL D0JWS5Ribonuclease PH pmp logo
BYersinia pestis (strain Pestoides F)YERPP03652UniProtKB/Swiss-Prot RNPH_YERPPRibonuclease PH
BYersinia pestis (strain Z176003)YERPZ00037UniProtKB/TrEMBL D5B8G5Ribonuclease PH pmp logo
BYersinia pestis bv. Antiqua (strain Angola)YERPG00040UniProtKB/Swiss-Prot RNPH_YERPGRibonuclease PH
BYersinia pestis bv. Antiqua (strain Antiqua)YERPA03302UniProtKB/Swiss-Prot RNPH_YERPARibonuclease PH
BYersinia pestis bv. Antiqua (strain Nepal516)YERPN03652UniProtKB/Swiss-Prot RNPH_YERPNRibonuclease PH
BYersinia pestis bv. Medievalis (strain Harbin 35)YERPH00181UniProtKB/TrEMBL E8P4L2ribonuclease PH pmp logo
BYersinia pseudotuberculosis serotype I (strain IP32953)YERPS00041UniProtKB/Swiss-Prot RNPH_YERPSRibonuclease PH
BYersinia pseudotuberculosis serotype IB (strain PB1/+)YERPB00041UniProtKB/Swiss-Prot RNPH_YERPBRibonuclease PH
BYersinia pseudotuberculosis serotype O:1b (strain IP 31758)YERP300052UniProtKB/Swiss-Prot RNPH_YERP3Ribonuclease PH
BYersinia pseudotuberculosis serotype O:3 (strain YPIII)YERPY04082UniProtKB/Swiss-Prot RNPH_YERPYRibonuclease PH
BHamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)HAMD500472UniProtKB/Swiss-Prot RNPH_HAMD5Ribonuclease PH
BCoxiella burnetii (strain CbuG_Q212)COXB201482UniProtKB/TrEMBL B6J205Ribonuclease PH
BCoxiella burnetii (strain Dugway 5J108-111)COXBN01664UniProtKB/Swiss-Prot RNPH_COXBNRibonuclease PH
BCoxiella burnetii (strain RSA 331 / Henzerling II)COXBR00338UniProtKB/Swiss-Prot RNPH_COXBRRibonuclease PH
BCoxiella burnetii (strain RSA 493 / Nine Mile phase I)COXBU00253UniProtKB/Swiss-Prot RNPH_COXBURibonuclease PH
BLegionella longbeachae serogroup 1 (strain NSW150)LEGLN00926UniProtKB/TrEMBL D3HQT1Ribonuclease PH
BLegionella pneumophila (strain Corby)LEGPC01444UniProtKB/Swiss-Prot RNPH_LEGPCRibonuclease PH
BLegionella pneumophila (strain Lens)LEGPL01985UniProtKB/Swiss-Prot RNPH_LEGPLRibonuclease PH (RNase PH) (tRNA nucleotidyltransferase)
BLegionella pneumophila (strain Paris)LEGPA01984UniProtKB/Swiss-Prot RNPH_LEGPARibonuclease PH (RNase PH) (tRNA nucleotidyltransferase)
BLegionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)LEGPH02209UniProtKB/Swiss-Prot RNPH_LEGPHRibonuclease PH FIG00135600
BMethylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)METCA02840UniProtKB/Swiss-Prot RNPH_METCARibonuclease PH
BMethylomicrobium alcaliphilumMETAA03551ncbi logo CCE25296.1Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) Evidence 2b : Function of strongly homologous gene; PubMedId : 1512252, 1512253, 1885537; Product type e : enzyme
BMethylomonas methanica (strain MC09)METMM04200UniProtKB/TrEMBL G0A3U7Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: mca:MCA3024 ribonuclease PH
BAlcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573)ALCBS00205UniProtKB/Swiss-Prot RNPH_ALCBSRibonuclease PH
BAlcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5)ALCDB00180UniProtKB/TrEMBL K0C7J5Ribonuclease PH
BKangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125)KANKD02420UniProtKB/TrEMBL C7R955ribonuclease PH KEGG: amc:MADE_04048 RNase PH (tRNA nucleotidyltransferase); TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BHahella chejuensis (strain KCTC 2396)HAHCH06039UniProtKB/Swiss-Prot RNPH_HAHCHribonuclease PH TIGRFAMsMatches:TIGR01966
BChromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)CHRSD03185UniProtKB/TrEMBL Q1QSK8ribonuclease PH pmp logo
BHalomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)HALED03392UniProtKB/TrEMBL E1VCA9ribonuclease PH Ribonuclease PH - Pseudomonas aeruginosa (strain PA7),InterPro: 3 exoribonuclease, High confidence in function and specificity
BMarinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)MARM103952UniProtKB/TrEMBL F2K047Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: mmw:Mmwyl1_4361 ribonuclease PH
BMarinomonas sp. (strain MWYL1)MARMS04289UniProtKB/Swiss-Prot RNPH_MARMSRibonuclease PH
BActinobacillus pleuropneumoniae serotype 3 (strain JL03)ACTPJ00055UniProtKB/Swiss-Prot RNPH_ACTPJRibonuclease PH
BActinobacillus pleuropneumoniae serotype 5b (strain L20)ACTP200054UniProtKB/Swiss-Prot RNPH_ACTP2Ribonuclease PH
BActinobacillus pleuropneumoniae serotype 7 (strain AP76)ACTP700055UniProtKB/Swiss-Prot RNPH_ACTP7Ribonuclease PH
BActinobacillus succinogenes (strain ATCC 55618 / 130Z)ACTSZ00414UniProtKB/Swiss-Prot RNPH_ACTSZRibonuclease PH
BAggregatibacter actinomycetemcomitans serotype C (strain D11S-1)AGGAD00591UniProtKB/TrEMBL C9R2I4Ribonuclease PH
BAggregatibacter aphrophilus (strain NJ8700)AGGAN01529UniProtKB/TrEMBL C6AQ70ribonuclease PH identified by Glimmer3; putative
BMannheimia succiniciproducens (strain MBEL55E)MANSM00250UniProtKB/Swiss-Prot RNPH_MANSMRph protein RNase PH
BGallibacterium anatis (strain UMN179)GALAU01048UniProtKB/TrEMBL F4H8U4ribonuclease PH
BHaemophilus ducreyi (strain 35000HP / ATCC 700724)HAEDU00252UniProtKB/Swiss-Prot RNPH_HAEDUribonuclease PH tRNA nucleotidyltransferase
BHaemophilus influenzae (strain 86-028NP)HAEI800329UniProtKB/Swiss-Prot RNPH_HAEI8ribonuclease PH RNase PH; tRNA nucleotidyltransferase; Similar to: HI0273, RNPH_HAEIN
BHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)HAEIN00267UniProtKB/Swiss-Prot RNPH_HAEINRibonuclease PH
BHaemophilus influenzae (strain PittEE)HAEIE00311UniProtKB/Swiss-Prot RNPH_HAEIERibonuclease PH
BHaemophilus influenzae (strain PittGG)HAEIG00668UniProtKB/Swiss-Prot RNPH_HAEIGRibonuclease PH
BHaemophilus influenzae (strain R2846 / 12)HAEI200298UniProtKB/TrEMBL E3GSN4Ribonuclease PH pmp logo
BHaemophilus influenzae (strain R2866)HAEI600297UniProtKB/TrEMBL E4QWM6Ribonuclease PH pmp logo
BHaemophilus parasuis serovar 5 (strain SH0165)HAEPS01167UniProtKB/Swiss-Prot RNPH_HAEPSRibonuclease PH
BHistophilus somni (strain 129Pt)HISS101295UniProtKB/Swiss-Prot RNPH_HISS1RNAse PH
BHistophilus somni (strain 2336)HISS200319UniProtKB/Swiss-Prot RNPH_HISS2ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease KEGG: hso:HS_1292 ribonuclease PH
BPasteurella multocida (strain Pm70)PASMU01876UniProtKB/Swiss-Prot RNPH_PASMURibonuclease PH
BAcinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)ACIAD00047UniProtKB/Swiss-Prot Q6FFX5ribonuclease PH (RNase PH), tRNA nucleotidyltransferase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme
BAcinetobacter baumannii (strain 1656-2)ACIB100073UniProtKB/TrEMBL E8PHT4RNase PH pmp logo
BAcinetobacter baumannii (strain AB0057)ACIB500078UniProtKB/Swiss-Prot RNPH_ACIB5Ribonuclease PH
BAcinetobacter baumannii (strain AB307-0294)ACIB303392UniProtKB/Swiss-Prot RNPH_ACIB3Ribonuclease PH
BAcinetobacter baumannii (strain ACICU)ACIBC00063UniProtKB/Swiss-Prot RNPH_ACIBCRNase PH
BAcinetobacter baumannii (strain AYE)ACIBY03525UniProtKB/Swiss-Prot RNPH_ACIBYRibonuclease PH (RNase PH), tRNA nucleotidyltransferase
BAcinetobacter baumannii (strain SDF)ACIBS00040UniProtKB/Swiss-Prot RNPH_ACIBSRibonuclease PH (RNase PH), tRNA nucleotidyltransferase
BAcinetobacter baumannii (strain TCDC-AB0715)ACIBD00071UniProtKB/TrEMBL F0QJ94ribonuclease PH pmp logo
BAcinetobacter calcoaceticus (strain PHEA-2)ACICP02958UniProtKB/TrEMBL F0KIP5ribonuclease PH (RNase PH), tRNA nucleotidyltransferase
BMoraxella catarrhalis (strain RH4)MORCR01369UniProtKB/TrEMBL D5VD92ribonuclease PH
BPsychrobacter arcticus (strain DSM 17307 / 273-4)PSYA201843UniProtKB/Swiss-Prot RNPH_PSYA2Ribonuclease PH
BPsychrobacter cryohalolentis (strain K5)PSYCK02133UniProtKB/Swiss-Prot RNPH_PSYCKRNAse PH
BPsychrobacter sp. (strain PRwf-1)PSYWF02124UniProtKB/Swiss-Prot RNPH_PSYWFRibonuclease PH
BAzotobacter vinelandii (strain DJ / ATCC BAA-1303)AZOVD00276UniProtKB/Swiss-Prot RNPH_AZOVDribonuclease PH
BCellvibrio japonicus (strain Ueda107)CELJU00200UniProtKB/Swiss-Prot RNPH_CELJURibonuclease PH
BPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)PSEAE05321UniProtKB/Swiss-Prot RNPH_PSEAERibonuclease PH pmp logo
BPseudomonas aeruginosa (strain LESB58)PSEA805701UniProtKB/Swiss-Prot RNPH_PSEA8Ribonuclease PH
BPseudomonas aeruginosa (strain PA7)PSEA705990UniProtKB/Swiss-Prot RNPH_PSEA7Ribonuclease PH
BPseudomonas aeruginosa (strain UCBPP-PA14)PSEAB05647UniProtKB/Swiss-Prot RNPH_PSEABribonuclease PH
BPseudomonas entomophila (strain L48)PSEE405044UniProtKB/TrEMBL Q1I2T6ribonuclease PH (RNase PH), tRNA nucleotidyltransferase Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme pmp logo
BPseudomonas fluorescens (strain Pf0-1)PSEPF05521UniProtKB/Swiss-Prot RNPH_PSEPFribonuclease PH
BPseudomonas fluorescens (strain SBW25)PSEFS05852UniProtKB/Swiss-Prot RNPH_PSEFS
BPseudomonas fulva (strain 12-X)PSEF100291UniProtKB/TrEMBL F6AF80Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: pfl:PFL_6059 ribonuclease PH
BPseudomonas mendocina (strain NK-01)PSEMN04713UniProtKB/TrEMBL F4DQZ2ribonuclease PH
BPseudomonas mendocina (strain ymp)PSEMY04327UniProtKB/Swiss-Prot RNPH_PSEMYRibonuclease PH
BPseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)PSEF505936UniProtKB/Swiss-Prot RNPH_PSEF5tRNA nucleotidyltransferase identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BPseudomonas putida (strain BIRD-1)PSEPB04921UniProtKB/TrEMBL E4RDU8Rph Ribonuclease PH
BPseudomonas putida (strain F1 / ATCC 700007)PSEP105136UniProtKB/Swiss-Prot RNPH_PSEP1Ribonuclease PH
BPseudomonas putida (strain GB-1)PSEPG05294UniProtKB/Swiss-Prot RNPH_PSEPGribonuclease PH unknown EC_number=2.7.7.56 KEGG: pen:PSEEN5439 ribonuclease PH (RNase PH), tRNA nucleotidyltransferase TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BPseudomonas putida (strain KT2440)PSEPK05186UniProtKB/Swiss-Prot RNPH_PSEPKRibonuclease PH
BPseudomonas putida (strain W619)PSEPW00179UniProtKB/Swiss-Prot RNPH_PSEPWRibonuclease PH
BPseudomonas stutzeri (strain A1501)PSEU500458UniProtKB/Swiss-Prot RNPH_PSEU5Ribonuclease PH
BPseudomonas syringae pv. syringae (strain B728a)PSEU200211UniProtKB/Swiss-Prot RNPH_PSEU2RNAse PH
BPseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)PSE1400185UniProtKB/TrEMBL Q48Q13ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966 pmp logo
BPseudomonas syringae pv. tomato (strain DC3000)PSESM00064UniProtKB/Swiss-Prot RNPH_PSESMRibonuclease PH
BFrancisella cf. novicida (strain 3523)FRACN00351UniProtKB/TrEMBL F4BJ64Ribonuclease PH
BFrancisella cf. novicida (strain Fx1)FRACF00374UniProtKB/TrEMBL F4BDI5Ribonuclease PH
BFrancisella tularensis subsp. novicida (strain U112)FRATN00379UniProtKB/Swiss-Prot RNPH_FRATNribonuclease PH
BFrancisella philomiragia subsp. philomiragia (strain ATCC 25017)FRAP200431UniProtKB/Swiss-Prot RNPH_FRAP2tRNA nucleotidyltransferase
BFrancisella tularensis subsp. holarctica (strain FTNF002-00 / FTA)FRATF00275UniProtKB/Swiss-Prot RNPH_FRATFRibonuclease PH
BFrancisella tularensis subsp. holarctica (strain LVS)FRATH00317UniProtKB/Swiss-Prot RNPH_FRATHRibonuclease PH
BFrancisella tularensis subsp. holarctica (strain OSU18)FRATO00264UniProtKB/Swiss-Prot RNPH_FRATOTRNA nucleotidyltransferase
BFrancisella tularensis subsp. mediasiatica (strain FSC147)FRATM00355UniProtKB/Swiss-Prot RNPH_FRATMRibonuclease PH
BFrancisella tularensis subsp. tularensis (strain FSC 198)FRAT100824UniProtKB/Swiss-Prot RNPH_FRAT1Ribonuclease PH Similar to P03842 Ribonuclease PH from Escherichia coli (238 aa). FASTA: opt: 997 Z-score: 1218.8 bits: 232.9 E(): 5.4e-60 Smith-Waterman score: 997; 65.665identity in 233 aa overlap.
BFrancisella tularensis subsp. tularensis (strain NE061598)FRATE00808UniProtKB/TrEMBL D2AN08Ribonuclease PH pmp logo
BFrancisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)FRATT00824UniProtKB/Swiss-Prot RNPH_FRATTRibonuclease PH Similar to P03842 Ribonuclease PH from Escherichia coli (238 aa). FASTA: opt: 997 Z-score: 1218.8 bits: 232.9 E(): 5.4e-60 Smith-Waterman score: 997; 65.665identity in 233 aa overlap. pmp logo
BFrancisella tularensis subsp. tularensis (strain WY96-3418)FRATW01033UniProtKB/Swiss-Prot RNPH_FRATWRibonuclease PH
BMethylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1)METNJ02956UniProtKB/TrEMBL I1XN62Ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BThioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1)THICA00023UniProtKB/TrEMBL F6DB59Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: tau:Tola_0187 ribonuclease PH
BVibrio fischeri (strain ATCC 700601 / ES114)VIBF100109UniProtKB/Swiss-Prot RNPH_VIBF1ribonuclease PH
BVibrio fischeri (strain MJ11)VIBFM00108UniProtKB/Swiss-Prot RNPH_VIBFMRibonuclease PH
BAliivibrio salmonicida (strain LFI1238)ALISL00152UniProtKB/Swiss-Prot RNPH_ALISLRibonuclease PH
BPhotobacterium profundumPHOPR00176UniProtKB/Swiss-Prot RNPH_PHOPRputative ribonuclease PH predicted by orpheus program predicted by glimmer program pmp logo
BVibrio anguillarum (strain ATCC 68554 / 775)VIBA700355UniProtKB/TrEMBL F7YJ06Ribonuclease PH
BVibrio campbellii (strain ATCC BAA-1116 / BB120)VIBCB02164UniProtKB/TrEMBL A7MSP2ribonuclease PH RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology. pmp logo
BVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)VIBCH00207UniProtKB/Swiss-Prot RNPH_VIBCHRibonuclease PH
BVibrio cholerae serotype O1 (strain MJ-1236)VIBCJ00360UniProtKB/TrEMBL C3NT04Ribonuclease PH pmp logo
BVibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)VIBC302412UniProtKB/TrEMBL A5F421Ribonuclease PH pmp logo
BVibrio cholerae serotype O1 (strain M66-2)VIBCM00194UniProtKB/TrEMBL C3LQH3 pmp logo
BVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)VIBPA00177UniProtKB/Swiss-Prot RNPH_VIBPARibonuclease PH
BVibrio sp. (strain Ex25)VIBSE00218UniProtKB/TrEMBL D0M3H6ribonuclease PH
BVibrio splendidus (strain LGP32)VIBSL00152UniProtKB/Swiss-Prot RNPH_VIBSLRibonuclease PH
BVibrio vulnificus (strain CMCP6)VIBVU00783UniProtKB/Swiss-Prot RNPH_VIBVURibonuclease PH
BVibrio vulnificus (strain YJ016)VIBVY00277UniProtKB/Swiss-Prot RNPH_VIBVYRibonuclease PH
BFrateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370)FRAAD00388UniProtKB/TrEMBL H8L3U4ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BPseudoxanthomonas suwonensis (strain 11-1)PSEUU00528UniProtKB/TrEMBL E6WQE3ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: xal:XALc_0795 hypothetical ribonuclease ph protein; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BStenotrophomonas maltophilia (strain K279a)STRMK03613UniProtKB/Swiss-Prot RNPH_STRMKPutative ribonuclease PH
BStenotrophomonas maltophilia (strain R551-3)STRM503251UniProtKB/Swiss-Prot RNPH_STRM5Ribonuclease PH
BXanthomonas campestris pv. campestris (strain 8004)XANC800926UniProtKB/Swiss-Prot RNPH_XANC8ribonuclease PH
BXanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)XANCP03156UniProtKB/Swiss-Prot RNPH_XANCPRibonuclease PH
BXanthomonas campestris pv. campestris (strain B100)XANCB00932UniProtKB/Swiss-Prot RNPH_XANCBRibonuclease PH
BXanthomonas axonopodis pv. citri (strain 306)XANAC03300UniProtKB/Swiss-Prot RNPH_XANACRibonuclease PH
BXanthomonas campestris pv. vesicatoria (strain 85-10)XANC503429UniProtKB/Swiss-Prot RNPH_XANC5ribonuclease PH
BXanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)XANOR01064UniProtKB/TrEMBL Q5H3S4ribonuclease PH identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark pmp logo
BXanthomonas oryzae pv. oryzae (strain MAFF 311018)XANOM00989UniProtKB/Swiss-Prot RNPH_XANOMRibonuclease PH Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) identified by sequence similarity; putative; ORF located using Blastx/Glimmer/GeneHacker
BXanthomonas oryzae pv. oryzae (strain PXO99A)XANOP03589UniProtKB/Swiss-Prot RNPH_XANOPRibonuclease PH
BXylella fastidiosa (strain 9a5c)XYLFA01473UniProtKB/Swiss-Prot RNPH_XYLFARibonuclease PH
BXylella fastidiosa (strain M12)XYLFM00742UniProtKB/Swiss-Prot RNPH_XYLFMtRNA nucleotidyltransferase
BXylella fastidiosa (strain M23)XYLF200720UniProtKB/Swiss-Prot RNPH_XYLF2Ribonuclease PH
BXylella fastidiosa (strain Temecula1 / ATCC 700964)XYLFT00674UniProtKB/Swiss-Prot RNPH_XYLFTRibonuclease PH
BXylella fastidiosa (strain GB514)XYLFG01676UniProtKB/TrEMBL E1RL59ribonuclease PH COG0689 RNase PH pmp logo
BBacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)BACMS03030UniProtKB/TrEMBL E1X036Ribonuclease PH
BBdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)BDEBA02468UniProtKB/Swiss-Prot RNPH_BDEBARibonuclease PH
BDesulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3)DESPD00791UniProtKB/TrEMBL E8RED2RNAse PH COGs: COG0689 RNase PH; InterPro IPR001247: IPR015847: IPR002381: IPR018336; KEGG: dps:DP1273 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDesulfocapsa sulfexigens (strain DSM 10523 / SB164P1)DESSD00082UniProtKB/TrEMBL M1N9Z4RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDesulfotalea psychrophila (strain LSv54 / DSM 12343)DESPS01273UniProtKB/Swiss-Prot RNPH_DESPSRibonuclease PH
BGeobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)GEOBB01188UniProtKB/TrEMBL B5EHL3Ribonuclease PH pmp logo
BGeobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32)GEODF02986UniProtKB/Swiss-Prot RNPH_GEODFribonuclease PH KEGG: gur:Gura_2256 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BGeobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ)GEOLS01984UniProtKB/Swiss-Prot RNPH_GEOLSRibonuclease PH
BGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)GEOMG01846UniProtKB/Swiss-Prot RNPH_GEOMGribonuclease PH
BGeobacter sp. (strain M18)GEOS801026UniProtKB/TrEMBL E8WLF0ribonuclease PH TIGRFAM: ribonuclease PH; KEGG: gem:GM21_3070 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BGeobacter sp. (strain M21)GEOSM03000UniProtKB/TrEMBL C6E3A6Ribonuclease PH
BGeobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)GEOSL01768UniProtKB/Swiss-Prot RNPH_GEOSLRibonuclease PH
BGeobacter uraniireducens (strain Rf4)GEOUR02155UniProtKB/Swiss-Prot RNPH_GEOURRibonuclease PH
BPelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)PELCD02165UniProtKB/TrEMBL Q3A2Y6Ribonuclease PH pmp logo
BPelobacter propionicus (strain DSM 2379)PELPD02191UniProtKB/TrEMBL A1ARE8ribonuclease PH KEGG: gme:Gmet_1876 ribonuclease PH TIGRFAM: ribonuclease PH PFAM: 3' exoribonuclease pmp logo
BAnaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258)ANAD203464UniProtKB/Swiss-Prot RNPH_ANAD2Ribonuclease PH
BAnaeromyxobacter dehalogenans (strain 2CP-C)ANADE03348UniProtKB/Swiss-Prot RNPH_ANADEribonuclease PH
BAnaeromyxobacter sp. (strain Fw109-5)ANADF03384UniProtKB/Swiss-Prot RNPH_ANADFRibonuclease PH
BAnaeromyxobacter sp. (strain K)ANASK03403UniProtKB/Swiss-Prot RNPH_ANASKRibonuclease PH
BMyxococcus fulvus (strain ATCC BAA-855 / HW-1)MYXFH03501UniProtKB/TrEMBL F8CQD6ribonuclease PH COG0689 RNase PH
BMyxococcus xanthus (strain DK 1622)MYXXD01922UniProtKB/Swiss-Prot RNPH_MYXXDribonuclease PH identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966
BSorangium cellulosum (strain So ce56)SORC507941UniProtKB/TrEMBL A9FGR1Ribonuclease PH pmp logo
BDesulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)DESAR01494UniProtKB/TrEMBL F2NHR4Ribonuclease PH COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR002381:IPR001247:IPR015847; KEGG: gka:GK2666 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; IMG reference gene:2504155088; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BDesulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1)DESTA00302UniProtKB/TrEMBL I4C0G5RNAse PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BSyntrophus aciditrophicus (strain SB)SYNAS01578UniProtKB/Swiss-Prot RNPH_SYNASribonuclease PH
BSpirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228)SPISS02319UniProtKB/TrEMBL E1R1V8ribonuclease PH COGs: COG0689 RNase PH; InterPro IPR018336:IPR001247:IPR015847:IPR002381; KEGG: pst:PSPTO_0077 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BSpirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1)SPITD01326UniProtKB/TrEMBL E0RU84Ribonuclease PH
BSpirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203)SPITZ01467UniProtKB/TrEMBL G0GAE5ribonuclease PH PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; COGs: COG0689 RNase PH; InterPro IPR001247:IPR015847:IPR002381; KEGG: sta:STHERM_c13650 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; SPTR: RNAse PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type
BAminobacterium colombiense (strain DSM 12261 / ALA-1)AMICL00286UniProtKB/TrEMBL D5ED07Ribonuclease PH
BThermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883)THEAS01511UniProtKB/TrEMBL D1B6W2ribonuclease PH KEGG: gsu:GSU1795 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
BThermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812)THEID01655UniProtKB/TrEMBL F8AB93ribonuclease PH COGs: COG0689 RNase PH; InterPro IPR002381:IPR018336:IPR001247:IPR015847; KEGG: gsu:GSU1795 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; IMG reference gene:2505285015; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
BThermodesulfobacterium geofontis (strain OPB45)THEGP01118UniProtKB/TrEMBL F8C684Ribonuclease PH PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: bmq:BMQ_4704 ribonuclease PH
BOpitutus terrae (strain DSM 11246 / PB90-1)OPITP04174UniProtKB/TrEMBL B1ZNZ4Ribonuclease PH pmp logo
BCoraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865)CORAD02983UniProtKB/TrEMBL D5EHY3Ribonuclease PH
BAkkermansia muciniphila (strain ATCC BAA-835)AKKM800387UniProtKB/TrEMBL B2UNC2Ribonuclease PH pmp logo
BThermobaculum terrenum (strain ATCC BAA-798 / YNP1)THET100761UniProtKB/TrEMBL D1CFI4Ribonuclease PH