List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 323246

This group has 12 members: 12 [E]ukaryota
Fingerprint: NLDQRVF

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Pan troglodytesPANTR01044  Ensembl ENSPTRP00000051316   -
[E] Microcebus murinusMICMU00143  Ensembl ENSMICP00000008708   -
[E] Otolemur garnettiiOTOGA12156  Ensembl ENSOGAP00000009971   -
[E] Cavia porcellusCAVPO03038  Ensembl ENSCPOP00000004842  
[E] Mus musculusMOUSE02016  UniProtKB/TrEMBL Q8C0N4  RIKEN cDNA 4933406M09 gene
[E] Rattus norvegicusRATNO16584  UniProtKB/TrEMBL Q6AXZ1  similar to UDP-N-acetylglucosamine:a-1,3-D-mannoside beta-1,4-N-acetylgluco (LOC289035), mRNA [Source:RefSeq_dna;Acc:NM_001013872]
[E] Canis familiarisCANFA06669  Ensembl ENSCAFP00000015192   -
[E] Felis catusFELCA04026  Ensembl ENSFCAP00000012153   -
[E] Bos taurusBOVIN07960  Ensembl ENSBTAP00000026550  Alpha-1,3-mannosyl-glycoprotein 4-beta-N- acetylglucosaminyltransferase-like protein LOC641515
[E] Myotis lucifugusMYOLU01166  Ensembl ENSMLUP00000006286   -
[E] Erinaceus europaeusERIEU01724  Ensembl ENSEEUP00000011005   -
[E] Equus caballusHORSE17560  Ensembl ENSECAP00000006325   -