List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 137290

protein-export membrane protein
This group has 6 members: 6 [B]acteria
Fingerprint: FIHIVIS

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Orientia tsutsugamushi (strain Boryong)ORITB00101  UniProtKB/TrEMBL A5CC42  Protein-export membrane protein
[B] Orientia tsutsugamushi (strain Ikeda)ORITI01057  UniProtKB/TrEMBL B3CTV0  Protein-export membrane protein SecG
[B] Rickettsia akari (strain Hartford)RICAH00115  UniProtKB/TrEMBL A8GM27  Protein-export membrane protein
[B] Rickettsia canadensis (strain McKiel)RICCK00076  UniProtKB/TrEMBL A8EXE6  Protein-export membrane protein
[B] Rickettsia prowazekiiRICPR00076  UniProtKB/Swiss-Prot SECG_RICPR  PROTEIN-EXPORT MEMBRANE PROTEIN SECG (secG)
[B] Rickettsia typhiRICTY00050  UniProtKB/Swiss-Prot SECG_RICTY  protein-export membrane protein SecG