List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 185062

hydrolase activity
This group has 4 members: 2 [E]ukaryota 2 [B]acteria
Fingerprint: TESGHCE

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Aspergillus fumigatusASPFU08967  UniProtKB/TrEMBL Q4WGT0  go_function: hydrolase activity, hydrolyzing N-glycosyl compounds [goid 0016799]; go_process: metabolism [goid 0008152] glycosyl hydrolase, putative
[E] Botrytis cinereaBOTFB05029  UniProtKB/TrEMBL A6RIG8  Botrytis cinerea hypothetical protein
[B] Streptomyces coelicolorSTRCO00105  UniProtKB/TrEMBL Q9RI60  SCJ11.47, possible xylosidase/arabinosidase, len: 509aa; similar to many xylosidase/arabinosidases especially in the N-terminal xylosidase region e.g. SW:XYLB_BUTFI xylosidase/arabinosidase from Butyrivibrio fibrisolvens (517 aa) fasta scores; opt: 582, z-score: 640.5, E(): 2.6e-28, (35.2% identity in 526 aa overlap) putative xylosidase/arabinosidase
[B] Bacillus licheniformis (strain DSM 13 / ATCC 14580)BACLD00805  UniProtKB/TrEMBL Q65MB6  InterProMatches:IPR006710, similar to xynB from B. subtilis,xylan beta-1,4-xylosidase; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolism (GO:0005975) Glycoside Hydrolase Family 43