List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 301712

Rhodanese domain protein
This group has 7 members: 7 [A]rchaea
Fingerprint: LGFKVKR

Protein List | Alignment | Close Groups | Phyletic Profile Download: download fasta, download darwin

[A] Methanocaldococcus jannaschiiMETJA00052  UniProtKB/Swiss-Prot Y052_METJA  Uncharacterized protein MJ0052
[A] Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280)META300915  UniProtKB/TrEMBL A6UVI6  Rhodanese domain protein
[A] Methanococcus maripaludisMETMP00900  UniProtKB/TrEMBL Q6LYT7  Rhodanese-like
[A] Methanococcus maripaludis (strain C5 / ATCC BAA-1333)METM500699  UniProtKB/TrEMBL A4FXT3  Rhodanese domain protein
[A] Methanococcus maripaludis (strain C6 / ATCC BAA-1332)METM601740  UniProtKB/TrEMBL A9AB44  Rhodanese domain protein
[A] Methanococcus maripaludis (strain C7 / ATCC BAA-1331)METM700144  UniProtKB/TrEMBL A6VFJ1  Rhodanese domain protein
[A] Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224)METVS00021  UniProtKB/TrEMBL A6UN64  Rhodanese domain protein