List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 222069

Uncharacterized protein
This group has 10 members: 5 [A]rchaea 5 [B]acteria
Fingerprint: AGKLYGM

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[A] Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2)SULIN02818  UniProtKB/TrEMBL C3NK92  
[A] Sulfolobus solfataricusSULSO01199  UniProtKB/TrEMBL Q97YI6  First ORF in transposon ISC1904
[A] Methanocaldococcus jannaschiiMETJA00014  UniProtKB/Swiss-Prot Y014_METJA  Uncharacterized protein MJ0014
[A] Pyrococcus furiosusPYRFU02010  UniProtKB/TrEMBL Q8TZH1  DNA invertase
[A] Thermococcus kodakaraensisPYRKO00649  UniProtKB/TrEMBL Q5JF72  predicted site-specific integrase/resolvase
[B] Frankia sp. (strain EAN1pec)FRASN05501  UniProtKB/TrEMBL A8KYP7  Resolvase domain
[B] Sulfurihydrogenibium sp. (strain YO3AOP1)SULSY01653  UniProtKB/TrEMBL B2V6Y2  Regulatory protein MerR
[B] Synechococcus sp. (strain JA-3-3Ab)SYNJA01654  UniProtKB/TrEMBL Q2JTR3  ISSoc2, resolvase identified by match to protein family HMM PF00239; match to protein family HMM PF00376
[B] Trichodesmium erythraeum (strain IMS101)TRIEI03104  UniProtKB/TrEMBL Q10YE3  DNA binding domain, excisionase family
[B] Xylella fastidiosa (strain M12)XYLFM01372  UniProtKB/TrEMBL B0U3P6  Putative uncharacterized protein