List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 274649

exopolysaccharide
This group has 5 members: 5 [B]acteria
Fingerprint: INCIIND

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)BACV801605  UniProtKB/TrEMBL A6L141  Glycosyltransferase family 14
[B] Anabaena sp. (strain PCC 7120)ANASP04278  UniProtKB/TrEMBL Q8YP77  Alr4323 protein
[B] Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081)LACDA01816   LACDA_A.1891  pseudo EpsIL, Putative glycosyltransferase (fragment)
[B] Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)STRT200990  UniProtKB/TrEMBL Q5M4A6  exopolysaccharide biosynthesis protein, glycosyl transferase
[B] Streptococcus thermophilus (strain CNRZ 1066)STRT101028  UniProtKB/TrEMBL Q5LZP1  exopolysaccharide gene claster protein