List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 230560

Putative uncharacterized protein
This group has 9 members: 9 [B]acteria
Fingerprint: ICRFDVA

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2)THERP00997  UniProtKB/TrEMBL B9L042  Putative uncharacterized protein
[B] Cyanothece (strain ATCC 51142)CYAA502082  UniProtKB/TrEMBL B1WNM5  Putative uncharacterized protein
[B] Microcystis aeruginosa (strain NIES-843)MICAN01223  UniProtKB/TrEMBL B0JTW7  Putative uncharacterized protein
[B] Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)SYNP202294  UniProtKB/TrEMBL B1XJM9  Putative uncharacterized protein
[B] Synechococcus sp. (strain JA-3-3Ab)SYNJA00664  UniProtKB/Swiss-Prot Y708_SYNJA  conserved hypothetical protein TIGR00252 identified by similarity to SP:Q8DI54; match to protein family HMM PF02021; match to protein family HMM TIGR00252
[B] Synechocystis sp. (strain PCC 6803)SYNY302409  UniProtKB/Swiss-Prot Y189_SYNY3  UPF0102 protein sll0189
[B] Thermosynechococcus elongatus (strain BP-1)THEEB01708  UniProtKB/Swiss-Prot Y1737_THEEB  UPF0102 protein tll1737
[B] Anabaena variabilis (strain ATCC 29413 / PCC 7937)ANAVT04709  UniProtKB/Swiss-Prot Y4800_ANAVT  Protein of unknown function UPF0102
[B] Anabaena sp. (strain PCC 7120)ANASP01778  UniProtKB/Swiss-Prot Y1796_ANASP  UPF0102 protein alr1796