List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 39062

Chaperone protein dnaK
This group has 11 members: 11 [B]acteria
Fingerprint: MQTNINL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[B] Cyanothece sp. (strain PCC 7425 / ATCC 29141)CYAP404333  UniProtKB/TrEMBL B8HLD3  Chaperone protein DnaK
[B] Microcystis aeruginosa (strain NIES-843)MICAN04613  UniProtKB/TrEMBL B0JW24  Heat shock protein 70
[B] Synechococcus sp. (strain PCC 6301)SYNP602015  UniProtKB/Swiss-Prot DNAK3_SYNP6  DnaK protein
[B] Synechocystis sp. (strain PCC 6803)SYNY302291  UniProtKB/Swiss-Prot DNAK1_SYNY3  Chaperone protein dnaK1
[B] Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)DICT601646  UniProtKB/Swiss-Prot DNAK_DICT6  Chaperone protein DnaK
[B] Clostridium botulinum (strain Alaska E43 / type E3)CLOBA00787  UniProtKB/Swiss-Prot DNAK_CLOBA  Chaperone protein DnaK
[B] Clostridium botulinum (strain Eklund 17B / type B)CLOBB00826  UniProtKB/Swiss-Prot DNAK_CLOBB  Chaperone protein DnaK
[B] Clostridium novyi (strain NT)CLONN01581  UniProtKB/Swiss-Prot DNAK_CLONN  chaperone protein DnaK identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350
[B] Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)CARHZ00403  UniProtKB/Swiss-Prot DNAK_CARHZ  identified by similarity to SP:P17820; match to protein family HMM PF00012; match to protein family HMM TIGR02350 chaperone protein dnaK
[B] Desulfotomaculum reducens (strain MI-1)DESRM02396  UniProtKB/Swiss-Prot DNAK_DESRM  Chaperone protein dnaK
[B] Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154)MYCCT00353  UniProtKB/Swiss-Prot DNAK_MYCCT  chaperone protein dnaK HSP70; identified by similarity to SP:P17820; match to protein family HMM PF00012; match to protein family HMM TIGR02350; heat shock protein 70; heat shock 70 kDa protein