List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
The jalview applet allows for numerous
display and export options.
Display closely related groups
The close groups are made of the set of all
groups that are linked by at least one pair
of orthologs.
Note that not all pairs of proteins coming
from close groups are orthologous. If that
were the case, the two groups would have
been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
across species. This can be useful to detect
proteins that have complementary function
(e.g. member of the same metabolic pathway).
Compare GO annotations
This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
allows to compare the annotations
and serves as an additional description
of this OMA group.
OMA fingerprint
The fingerprint is a subsequence that is specific to a
certain group in the current OMA release
Since the group number is specific to a release, this
is the best way to track a group across releases.
OMA

Keyword Protein Sequence Group Entry

OMA Group 93373

acyl-CoA binding protein
This group has 7 members: 7 [E]ukaryota
Fingerprint: QLQLYGL

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Caenorhabditis remaneiCAERE04801   WBGene00055885  locus:Cre-acbp-5
[E] Dictyostelium discoideumDICDI10757  UniProtKB/Swiss-Prot ACBD6_DICDI  
[E] Oryza sativaORYSA12401   BAF16206.1  Acyl-CoA binding protein contains InterPro domain(s): IPR000582, IPR002110 has GO asignment(s): GO:0000062@[NR] similar to Q9ZRC2 supported by AK105775
[E] Sorghum bicolorSORBI34181  UniProtKB/TrEMBL C5YAM1  jgi|Sorbi1|5058159|Sb06g033230
[E] Populus trichocarpaPOPTR30316  UniProtKB/TrEMBL B9IDN1  jgi|Poptr1_1|732842|estExt_Genewise1_v1.C_LG_XV0310 [DNA did not match protein] [DNA partly invalid]
[E] Arabidopsis thalianaARATH25020  UniProtKB/Swiss-Prot ACBP1_ARATH  acyl-CoA binding protein, putative / ACBP, putative, similar to acyl-CoA binding protein 2 (Arabidopsis thaliana) gi|12039034|gb|AAG46057; go_component: plasma membrane [goid GO:0010288@[IEP]; GO:0005886@[NR]] [evidence IDA] [pmid 10363372]; go_component: cell wall (sensu Magnoliophyta) [goid GO:0009505] [evidence IDA] [pmid 10363372]; go_function: acyl-CoA binding [goid GO:0000062] [evidence IDA] [pmid 9862500]; go_process: lipid transport [goid GO:0006869] [evidence TAS] [pmid 10363372] ACBP1 (ACYL-COA BINDING PROTEIN)
[E] Vitis viniferaVITVI20645  UniProtKB/TrEMBL A7QF10