List of all proteins in the group
Allows comparison of IDs and descriptions
of all proteins in the OMA Group.
Display an MSA of all sequences in the group.
The MSA is created using the Mafft program.
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The close groups are made of the set of all
groups that are linked by at least one pair
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Note that not all pairs of proteins coming
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been merged.
Display phyletic profile
The "Phyletic profile" displays OMA groups
that have similar patterns of presence/absence
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proteins that have complementary function
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This function displays a table of all
Gene Ontology (GO) annotations on
proteins of the OMA group. This
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OMA fingerprint
The fingerprint is a subsequence that is specific to a
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Since the group number is specific to a release, this
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OMA

Keyword Protein Sequence Group Entry

OMA Group 24772

alanine racemase domain protein
This group has 127 members: 41 [E]ukaryota 86 [B]acteria
Fingerprint: HFALTAK

Protein List | Alignment | Close Groups | Phyletic Profile | Ontology Download: download fasta, download darwin

[E] Homo sapiensHUMAN01406  UniProtKB/Swiss-Prot PROSC_HUMAN   -
[E] Gorilla gorillaGORGO09841  Ensembl ENSGGOP00000012551  Proline synthetase co-transcribed bacterial homolog protein [Source:UniProtKB/Swiss-Prot;Acc:O94903]
[E] Pan troglodytesPANTR10524  Ensembl ENSPTRP00000034513   -
[E] Tarsius syrichtaTARSY12699  Ensembl ENSTSYP00000013069  Proline synthetase co-transcribed bacterial homolog protein [Source:UniProtKB/Swiss-Prot;Acc:O94903]
[E] Otolemur garnettiiOTOGA02028  Ensembl ENSOGAP00000005116   -
[E] Ochotona princepsOCHPR04329  Ensembl ENSOPRP00000003197   -
[E] Mus musculusMOUSE04117  UniProtKB/Swiss-Prot PROSC_MOUSE  proline synthetase co-transcribed
[E] Rattus norvegicusRATNO09413  Ensembl ENSRNOP00000055400  proline synthetase co-transcribed [Source:RefSeq_peptide;Acc:NP_001100790]
[E] Tupaia belangeriTUPGB00376  Ensembl ENSTBEP00000007580   -
[E] Felis catusFELCA01497  Ensembl ENSFCAP00000014408   -
[E] Bos taurusBOVIN13948  UniProtKB/Swiss-Prot PROSC_BOVIN  Proline synthetase co-transcribed bacterial homolog protein
[E] Pteropus vampyrusPTEVA01491  Ensembl ENSPVAP00000005673   -
[E] Equus caballusHORSE13346  Ensembl ENSECAP00000007044  Proline synthetase co-transcribed bacterial homolog protein.
[E] Gallus gallusCHICK06478  Ensembl ENSGALP00000004889   -
[E] Taeniopygia guttataTAEGU13327  Ensembl ENSTGUP00000004799  Proline synthetase co-transcribed bacterial homolog protein [Source:UniProtKB/Swiss-Prot;Acc:O94903]
[E] Anolis carolinensisANOCA12226  Ensembl ENSACAP00000000180  Proline synthetase co-transcribed bacterial homolog protein [Source:UniProtKB/Swiss-Prot;Acc:O94903]
[E] Takifugu rubripesFUGRU02238  Ensembl ENSTRUP00000009144  Proline synthetase co-transcribed bacterial homolog protein
[E] Branchiostoma floridaeBRAFL18082  UniProtKB/TrEMBL C3Y5V7  jgi|Brafl1|126227|estExt_fgenesh2_pg.C_2080015
[E] Lottia giganteaLOTGI20928   231455  jgi|Lotgi1|231455|estExt_fgenesh2_pg.C_sca_190275
[E] Ixodes scapularisIXOSC07558  UniProtKB/TrEMBL B7PTQ2  proline synthetase associated protein, putative
[E] Drosophila melanogasterDROME11414  UniProtKB/TrEMBL Q9VA97  CG1983-PA
[E] Anopheles gambiaeANOGA03501  UniProtKB/TrEMBL Q7PXV8   -
[E] Aedes aegyptiAEDAE12290  UniProtKB/TrEMBL Q17F75   -
[E] Pristionchus pacificusPRIPA03283   WBGene00092864  status:Partially_confirmed
[E] Caenorhabditis brenneriCAEBI12316   WBGene00151659  
[E] Caenorhabditis elegansCAEEL04280  UniProtKB/Swiss-Prot PROSC_CAEEL  UPF0001 protein F09E5.8.
[E] Caenorhabditis japonicaCAEJA08195   WBGene00127650  status:Predicted
[E] Caenorhabditis remaneiCAERE11547   WBGene00080226  
[E] Dictyostelium discoideumDICDI05228  UniProtKB/Swiss-Prot PROSC_DICDI  
[E] Leishmania majorLEIMA05083  UniProtKB/TrEMBL Q4QAZ0  LmjF23.1480, predicted protein, len = 246 aa, probably putative proline synthetase associated protein; predicted pI = 5.1999; good similarity to Q9SZ26, putative proline synthetase associated protein in Arabidopsis thaliana; contains a alanine racemase, N-terminal domain hypothetical protein, conserved
[E] Leishmania braziliensisLEIBR05016  UniProtKB/TrEMBL A4HD32  hypothetical protein, conserved
[E] Leishmania infantumLEIIN04943  UniProtKB/TrEMBL A4I0L9  hypothetical protein, conserved
[E] Phaeosphaeria nodorumPHANO14128  UniProtKB/TrEMBL Q0UJC0  hypothetical protein
[E] Yarrowia lipolyticaYARLI04780  UniProtKB/TrEMBL Q6CB49  similar to sp|P38197 Saccharomyces cerevisiae YBL036c, start by similarity
[E] Kluyveromyces lactisKLULA04588  UniProtKB/TrEMBL Q6CVG3  similar to sp|P38197 Saccharomyces cerevisiae YBL036c singleton, start by similarity
[E] Pichia stipitisPICST03756  UniProtKB/TrEMBL A3LWT3  predicted protein go_function: alanine racemase activity; pyridoxal phosphate binding
[E] Schizosaccharomyces pombeSCHPO01152  UniProtKB/Swiss-Prot YKC9_SCHPO  UPF0001 family; proline synthase (predicted); pyridoxal phosphate cofactor (predicted); similar to S. cerevisiae YBL036C
[E] Debaryomyces hanseniiDEBHA05112  UniProtKB/TrEMBL Q6BK12  DEHA2F25762p;similar to uniprot|P38197 Saccharomyces cerevisiae YBL036C Single-domain racemase;
[E] Sorghum bicolorSORBI34752  UniProtKB/TrEMBL C5Z044  jgi|Sorbi1|5060111|Sb09g003850
[E] Populus trichocarpaPOPTR40430  UniProtKB/TrEMBL B9N8E2  jgi|Poptr1_1|811711|fgenesh4_pm.C_scaffold_166000008
[E] Vitis viniferaVITVI15926  UniProtKB/TrEMBL A7P0L6  
[B] Dehalococcoides ethenogenes (strain 195)DEHE100657  UniProtKB/TrEMBL Q3Z8F8  identified by match to protein family HMM TIGR00044 conserved hypothetical protein TIGR00044
[B] Dehalococcoides sp. (strain BAV1)DEHSB00663  UniProtKB/TrEMBL A5FRA5  Alanine racemase domain protein
[B] Dehalococcoides sp. (strain CBDB1)DEHSC00613  UniProtKB/TrEMBL Q3ZXB1  conserved hypothetical protein
[B] Synechococcus sp. (strain CC9902)SYNS900640  UniProtKB/TrEMBL Q3AZ62  Protein of unknown function UPF0001
[B] Trichodesmium erythraeum (strain IMS101)TRIEI04176  UniProtKB/TrEMBL Q10V97  Hypothetical protein
[B] Prochlorococcus marinusPROMA00391  UniProtKB/TrEMBL Q7VDI5  Predicted enzyme with a TIM-barrel fold
[B] Prochlorococcus marinus (strain MIT 9211)PROM400391  UniProtKB/TrEMBL A9BE12  Predicted enzyme with a TIM-barrel fold
[B] Prochlorococcus marinus (strain MIT 9215)PROM200469  UniProtKB/TrEMBL A8G3A6  Predicted enzyme with a TIM-barrel fold
[B] Prochlorococcus marinus (strain MIT 9301)PROM000415  UniProtKB/TrEMBL A3PBB2  Predicted enzyme with a TIM-barrel fold COG325 Predicted enzyme with a TIM-barrel fold [General function prediction only]
[B] Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4)PROMP00442  UniProtKB/TrEMBL Q7V2S3  Putative uncharacterized protein
[B] Streptococcus agalactiae (serotype V)STRA500474  UniProtKB/TrEMBL Q8E182  identified by match to PFAM protein family HMM PF01168 ylmE protein, putative
[B] Streptococcus agalactiae serotype IaSTRA100480  UniProtKB/TrEMBL Q3K2N9  identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044 conserved hypothetical protein TIGR00044
[B] Caulobacter crescentusCAUCR03696  UniProtKB/TrEMBL Q9A221  Putative uncharacterized protein
[B] Caulobacter sp. (strain K31)CAUSK04949  UniProtKB/TrEMBL B0T6F1  Alanine racemase domain protein
[B] Bartonella bacilliformis (strain ATCC 35685 / KC583)BARBK00101  UniProtKB/TrEMBL A1UR37  Hypothetical protein
[B] Bartonella henselaeBARHE01449  UniProtKB/TrEMBL Q6G1W1  hypothetical protein
[B] Bartonella quintanaBARQU01178  UniProtKB/TrEMBL Q6FYL5  hypothetical protein
[B] Bartonella tribocorum (strain CIP 105476 / IBS 506)BART101750  UniProtKB/TrEMBL A9IYZ0  conserved hypothetical protein nterPro: Protein of unknown function UPF0001 hypothetical protein
[B] Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)BEII900223  UniProtKB/TrEMBL B2ICJ3  Alanine racemase domain protein
[B] Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906)METSB00328  UniProtKB/TrEMBL B8EQP3  Alanine racemase domain protein
[B] Bradyrhizobium japonicumBRAJA00621  UniProtKB/TrEMBL Q89WQ5  Bll0623 protein
[B] Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)BRASB00164  UniProtKB/TrEMBL A5E8H7  Hypothetical protein
[B] Bradyrhizobium sp. (strain ORS278)BRASO00178  UniProtKB/TrEMBL A4YJS5  Hypothetical protein
[B] Nitrobacter hamburgensis (strain X14 / DSM 10229)NITHX00094  UniProtKB/TrEMBL Q1QS00  Protein of unknown function UPF0001
[B] Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)NITWN00087  UniProtKB/TrEMBL Q3SWI4  Protein of unknown function UPF0001
[B] Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)OLICO00355  UniProtKB/TrEMBL B6JAI2  Pyridoxal phosphate enzyme, YggS family
[B] Rhodopseudomonas palustris (strain BisA53)RHOP500389  UniProtKB/TrEMBL Q07UN3  Protein of unknown function UPF0001 TIGRFAM: Protein of unknown function UPF0001 PFAM: alanine racemase domain protein KEGG: rpd:RPD_0438 protein of unknown function UPF0001
[B] Rhodopseudomonas palustris (strain BisB18)RHOPB00278  UniProtKB/TrEMBL Q21CM9  Protein of unknown function UPF0001
[B] Rhodopseudomonas palustris (strain BisB5)RHOPS00433  UniProtKB/TrEMBL Q13E13  Protein of unknown function UPF0001
[B] Rhodopseudomonas palustris (strain HaA2)RHOP200382  UniProtKB/TrEMBL Q2J366  Protein of unknown function UPF0001
[B] Rhodopseudomonas palustris (strain TIE-1)RHOPT00286  UniProtKB/TrEMBL B3Q899  Alanine racemase domain protein
[B] Brucella abortusBRUAB01674  UniProtKB/TrEMBL C4IT13  similar to BR1808, conserved hypothetical protein TIGR00044 conserved hypothetical protein TIGR00044
[B] Brucella abortus (strain 2308)BRUA201802  UniProtKB/TrEMBL Q2YLH8  Protein of unknown function UPF0001
[B] Brucella abortus (strain S19)BRUA101609  UniProtKB/TrEMBL B2S7N2  Putative uncharacterized protein
[B] Brucella canis (strain ATCC 23365 / NCTC 10854)BRUC201726  UniProtKB/TrEMBL A9M846  Putative uncharacterized protein
[B] Brucella melitensisBRUME00241  UniProtKB/TrEMBL D0B9Z6  PHOSPHATE REGULON SENSOR PROTEIN PHOR
[B] Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)BRUO201550  UniProtKB/TrEMBL A5VSF0  Putative uncharacterized protein
[B] Brucella suisBRUSU01735  UniProtKB/TrEMBL D0BJ06  identified by match to TIGR protein family HMM TIGR00044 conserved hypothetical protein TIGR00044
[B] Brucella suis (strain ATCC 23445 / NCTC 10510)BRUSI03080  UniProtKB/TrEMBL A9WWT2  conserved hypothetical protein
[B] Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)OCHA401076  UniProtKB/TrEMBL A6WXW0  Alanine racemase domain protein
[B] Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688)METC401738  UniProtKB/TrEMBL B7KV49  alanine racemase domain protein PFAM: alanine racemase domain protein; KEGG: mex:Mext_1578 alanine racemase domain-containing protein
[B] Methylobacterium extorquens (strain PA1)METEP01542  UniProtKB/TrEMBL A9W321  Alanine racemase domain protein
[B] Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)METPB01618  UniProtKB/TrEMBL B1ZGG4  Alanine racemase domain protein
[B] Methylobacterium sp. (strain 4-46)METS401323  UniProtKB/TrEMBL B0UJI1  Alanine racemase domain protein
[B] Mesorhizobium sp. (strain BNC1)MESSB03173  UniProtKB/TrEMBL Q11DE5  Protein of unknown function UPF0001 TIGRFAM: Protein of unknown function UPF0001 PFAM: alanine racemase-like KEGG: mlo:mlr4078 hypothetical protein
[B] Rhizobium lotiRHILO03136  UniProtKB/TrEMBL Q98EU6  hypothetical protein
[B] Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)PARL101227  UniProtKB/TrEMBL A7HSM2  Alanine racemase domain protein
[B] Agrobacterium radiobacter (strain K84 / ATCC BAA-868)AGRRK03728  UniProtKB/TrEMBL B9JEV6  Putative uncharacterized protein
[B] Agrobacterium tumefaciens (strain C58 / ATCC 33970)AGRT502673  UniProtKB/TrEMBL A9CHE9  Putative uncharacterized protein
[B] Rhizobium etli (strain CFN 42 / ATCC 51251)RHIEC04022  UniProtKB/TrEMBL Q2K2S8  hypothetical conserved protein similar to SMc02812 [Sinorhizobium meliloti] Similar to swissprot:Q92KW9 Putative location:bacterial cytoplasm Psort-Score: 0.4404
[B] Rhizobium etli (strain CIAT 652)RHIE604345  UniProtKB/TrEMBL B3PS45  Putative alanine racemase protein
[B] Rhizobium leguminosarum bv. trifolii (strain WSM2304)RHILW03873  UniProtKB/TrEMBL B5ZV39  Alanine racemase domain protein
[B] Rhizobium leguminosarum bv. viciae (strain 3841)RHIL304714  UniProtKB/TrEMBL Q1MA26  putative racemase similarity:fasta; with=UniProt:Q92KW9_RHIME (EMBL:SME591793); Rhizobium meliloti (Sinorhizobium meliloti).; Hypothetical protein SMc02812.; length=219; id 79.452; 219 aa overlap; query 1-219; subject 1-219
[B] Rhizobium melilotiRHIME03284  UniProtKB/TrEMBL Q92KW9  Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN
[B] Sinorhizobium medicae (strain WSM419)SINMW03137  UniProtKB/TrEMBL A6UEE1  Alanine racemase domain protein
[B] Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)AZOC500274  UniProtKB/TrEMBL A8IJB0  Putative uncharacterized protein
[B] Hyphomonas neptunium (strain ATCC 15444)HYPNA03483  UniProtKB/TrEMBL Q0BWC0  Alanine racemase, N-terminal domain protein
[B] Dinoroseobacter shibae (strain DFL 12)DINSH00042  UniProtKB/TrEMBL A8LJW5  Alanine racemase domain protein
[B] Jannaschia sp. (strain CCS1)JANSC00413  UniProtKB/TrEMBL Q28VD1  Protein of unknown function UPF0001
[B] Paracoccus denitrificans (strain Pd 1222)PARDP02675  UniProtKB/TrEMBL A1B5Q2  alanine racemase domain protein PFAM: alanine racemase domain protein KEGG: rsp:RSP_0844 hypothetical protein
[B] Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)RHOS503009  UniProtKB/TrEMBL A4WXA1  Alanine racemase domain protein
[B] Rhodobacter sphaeroides (strain KD131 / KCTC 12085)RHOSK02191  UniProtKB/TrEMBL B9KMI2  Alanine racemase domain protein
[B] Roseobacter denitrificans (strain ATCC 33942 / OCh 114)ROSDO00042  UniProtKB/TrEMBL Q16E09  conserved hypothetical protein
[B] Silicibacter pomeroyiSILPO03339  UniProtKB/TrEMBL Q5LMY3  identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044 alanine racemase domain protein
[B] Silicibacter sp. (strain TM1040)SILST00048  UniProtKB/TrEMBL Q1GKN5  Protein of unknown function UPF0001 TIGRFAM: Protein of unknown function UPF0001: (9.3e-45) PFAM: alanine racemase-like: (7e-09) KEGG: sil:SPO3429 alanine racemase domain protein, ev=3e-99, 82% identity
[B] Acidiphilium cryptum (strain JF-5)ACICJ02012  UniProtKB/TrEMBL A5G072  Alanine racemase domain protein
[B] Gluconobacter oxydansGLUOX01510  UniProtKB/TrEMBL Q5FQK9  Hypothetical protein
[B] Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)MAGMM00022   BAE48826.1  Predicted enzyme with a TIM-barrel fold
[B] Rhodospirillum centenum (strain ATCC 51521 / SW)RHOCS02475  UniProtKB/TrEMBL B6IU51  Putative uncharacterized protein
[B] Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)RHORT03620  UniProtKB/TrEMBL Q2RN67  Protein of unknown function UPF0001
[B] Pelagibacter ubiquePELUB00358  UniProtKB/TrEMBL Q1V1B9  hypothetical protein
[B] Erythrobacter litoralis (strain HTCC2594)ERYLH02355  UniProtKB/TrEMBL Q2N782  hypothetical protein COG0325 Predicted enzyme with a TIM-barrel fold
[B] Novosphingobium aromaticivorans (strain DSM 12444)NOVAD00432  UniProtKB/TrEMBL Q2GB92  Putative uncharacterized protein
[B] Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)SPHWW02825  UniProtKB/TrEMBL A5VA93  Alanine racemase domain protein
[B] Sphingopyxis alaskensisSPHAL02991  UniProtKB/TrEMBL Q1GNP3  Protein of unknown function UPF0001
[B] Zymomonas mobilisZYMMO00140  UniProtKB/TrEMBL Q5NR88  predicted enzyme with a TIM-barrel fold; COG0325 conserved hypothetical protein
[B] Ralstonia solanacearumRALSO04063  UniProtKB/TrEMBL Q8XRZ8  Product confidence : hypothetical Gene name confidence : hypothetical predicted by Codon_usage predicted by Homology predicted by FrameD CONSERVED HYPOTHETICAL PROTEIN
[B] Desulfococcus oleovorans (strain DSM 6200 / Hxd3)DESOH01173  UniProtKB/TrEMBL A8ZXM7  Alanine racemase domain protein
[B] Lawsonia intracellularis (strain PHE/MN1-00)LAWIP00642  UniProtKB/TrEMBL Q1MQN0  predicted enzyme with a TIM-barrel fold
[B] Helicobacter hepaticusHELHP01676  UniProtKB/TrEMBL Q7VFJ4  similar to Helicobacter pylori HP0395 conserved hypothetical protein
[B] Helicobacter pyloriHELPY00391  UniProtKB/Swiss-Prot Y395_HELPY  similar to GB:L42023 PID:1003084 PID:1222000 PID:1204348 SP:P44506 percent identity: 40.26; identified by sequence similarity; putative conserved hypothetical protein
[B] Helicobacter pylori (strain G27)HELPG00975  UniProtKB/TrEMBL B5Z856  Putative uncharacterized protein
[B] Helicobacter pylori (strain HPAG1)HELPH00995  UniProtKB/TrEMBL Q1CSK8  hypothetical protein
[B] Helicobacter pylori J99HELPJ00982  UniProtKB/Swiss-Prot Y395_HELPJ  Hypothetical UPF0001 protein JHP0986
[B] Francisella tularensis subsp. novicida (strain U112)FRATN00099  UniProtKB/TrEMBL A0Q445  conserved protein of unknown function
[B] Akkermansia muciniphila (strain ATCC BAA-835)AKKM801733  UniProtKB/TrEMBL B2UMM5  Alanine racemase domain protein